Searched refs:geno_miss (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/gemma/GEMMA-0.98.3/src/ |
| H A D | gemma_io.cpp | 1073 vector<size_t> geno_miss; in Bimbam_ReadOneSNP() local
1082 geno_miss.push_back(c_idv); in Bimbam_ReadOneSNP()
1122 vector<size_t> geno_miss; in Plink_ReadOneSNP() local
1152 geno_miss.push_back(c_idv); in Plink_ReadOneSNP()
1473 gsl_vector_set_all(geno_miss, 0); in BimbamKin()
1480 gsl_vector_set(geno_miss, i, 0); in BimbamKin()
1487 gsl_vector_set(geno_miss, i, 1); in BimbamKin()
1573 gsl_vector_free(geno_miss); in BimbamKin()
2804 gsl_vector_set_all(geno_miss, 0); in BimbamKinUncentered()
2813 gsl_vector_set(geno_miss, i, 0); in BimbamKinUncentered()
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| H A D | vc.cpp | 2239 gsl_vector *geno_miss = gsl_vector_alloc(ni_test); in BimbamXwz() local
2260 gsl_vector_set_all(geno_miss, 0); in BimbamXwz()
2269 gsl_vector_set(geno_miss, i, 0); in BimbamXwz()
2274 gsl_vector_set(geno_miss, j, 1); in BimbamXwz()
2287 if (gsl_vector_get(geno_miss, i) == 0) { in BimbamXwz()
2304 gsl_vector_free(geno_miss); in BimbamXwz()
2513 gsl_vector_set_all(geno_miss, 0); in BimbamXtXwz()
2522 gsl_vector_set(geno_miss, i, 0); in BimbamXtXwz()
2527 gsl_vector_set(geno_miss, j, 1); in BimbamXtXwz()
2540 if (gsl_vector_get(geno_miss, i) == 0) { in BimbamXtXwz()
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