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/dports/biology/avida/avida-2.12.4-src/avida-core/source/cpu/
H A DcHardwareBase.cc619 Sequence genome_copy = Sequence(genome); in doSlipMutation() local
623 …int to = (from == 0) ? ctx.GetRandom().GetInt(genome_copy.GetSize()) : ctx.GetRandom().GetInt(geno… in doSlipMutation()
637 genome[from + i] = genome_copy[to + i]; in doSlipMutation()
682 …for (int i = insertion_length; i < genome_copy.GetSize() - to; i++) genome[from + i] = genome_copy in doSlipMutation()
698 Sequence genome_copy(genome); in doTransMutation() local
702 …int to = (from == 0) ? ctx.GetRandom().GetInt(genome_copy.GetSize()) : ctx.GetRandom().GetInt(geno… in doTransMutation()
752 …for (int i = ins_loc; i < genome_copy.GetSize(); i++) genome[i + insertion_length] = genome_copy[i… in doTransMutation()
772 Sequence genome_copy(genome); in doLGTMutation() local
798 …for (int i = ins_loc; i < genome_copy.GetSize(); i++) genome[i + ins_seq.GetSize()] = genome_copy[… in doLGTMutation()
805 Sequence genome_copy(genome); in doLGTMutation() local
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