| /dports/biology/plink/plink-ng-79b2df8c/2.0/ |
| H A D | plink2_data.cc | 1700 uintptr_t** genovecs; member
1745 pgv.genovec = ctx->genovecs[tidx]; in LoadAlleleAndGenoCountsThread()
2537 …k_left(), pgr_alloc_cacheline_ct, 0, 0, 0, pgfip, &calc_thread_ct, &ctx.genovecs, mhc_needed? (&ct…
4681 uintptr_t** genovecs; member
4696 uintptr_t* genovec = ctx->genovecs[tidx]; in MakeBedlikeThread()
4938 …_cacheline_ct, 0, 2 * (sample_ct4 + 1), 0, pgfip, &calc_thread_ct, &ctx.genovecs, nullptr, nullptr…
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| H A D | plink2_matrix_calc.cc | 554 uintptr_t** genovecs; member
586 uintptr_t* genovec = ctx->genovecs[tidx]; in CalcKingSparseThread()
1415 …, thread_xalloc_cacheline_ct, 0, 0, pgfip, &calc_thread_ct, &sparse_ctx.genovecs, nullptr, nullptr… in CalcKing()
6916 uintptr_t** genovecs; member
6958 uintptr_t* genovec = ctx->genovecs[tidx]; in VscoreThread()
7681 …cheline_ct, per_variant_xalloc_byte_ct, 0, pgfip, &calc_thread_ct, &ctx.genovecs, nullptr, nullptr… in Vscore()
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| H A D | plink2_filter.cc | 3254 uintptr_t** genovecs; member
3281 uintptr_t* genovec_buf = ctx->genovecs[tidx]; in LoadSampleMissingCtsThread()
3442 …eline_ct, thread_alloc_cacheline_ct, 0, 0, pgfip, &calc_thread_ct, &ctx.genovecs, nullptr, nullptr… in LoadSampleMissingCts()
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| H A D | plink2_export.cc | 1522 uintptr_t** genovecs; member
1548 uintptr_t* genovec = ctx->genovecs[tidx]; in ExportBgen11Thread()
1805 …line_ct, thread_xalloc_cacheline_ct, 0, 0, pgfip, &calc_thread_ct, &ctx.genovecs, nullptr, nullptr…
2306 uintptr_t** genovecs; member
2337 pgv.genovec = ctx->genovecs[tidx]; in ExportBgen13Thread()
3431 …line_ct, thread_xalloc_cacheline_ct, 0, 0, pgfip, &calc_thread_ct, &ctx.genovecs, nullptr, phase_i…
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| H A D | plink2_glm.cc | 3247 uintptr_t** genovecs; member
3290 pgv.genovec = common->genovecs[tidx]; in GlmLogisticThread()
5586 …yte_ct, per_alt_allele_xalloc_byte_ct, pgfip, &calc_thread_ct, &common->genovecs, max_extra_allele… in GlmLogistic()
6418 pgv.genovec = common->genovecs[tidx]; in GlmLinearThread()
7784 …yte_ct, per_alt_allele_xalloc_byte_ct, pgfip, &calc_thread_ct, &common->genovecs, max_extra_allele… in GlmLinear()
8480 pgv.genovec = common->genovecs[tidx]; in GlmLinearSubbatchThread()
9955 …yte_ct, per_alt_allele_xalloc_byte_ct, pgfip, &calc_thread_ct, &common->genovecs, max_extra_allele… in GlmLinearBatch()
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| H A D | plink2_misc.cc | 5768 uintptr_t** genovecs; member
5835 uintptr_t* genovec = ctx->genovecs[tidx]; in SampleCountsThread()
6584 …line_ct, thread_xalloc_cacheline_ct, 0, 0, pgfip, &calc_thread_ct, &ctx.genovecs, mhc_needed? (&ct… in SampleCounts()
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