/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-v0.3.1/src/ |
H A D | concatenatedGraph.c | 86 while (getArc(nodeA) != NULL) in concatenateNodes() 87 destroyArc(getArc(nodeA), graph); in concatenateNodes() 163 (getDestination(getArc(nodeB)))) == in concatenateStringOfNodes() 168 nodeB = getDestination(getArc(nodeB)); in concatenateStringOfNodes() 235 arc = getArc(currentNode); in concatenateStringOfNodes() 262 (getDestination(getArc(node)))) == in concatenateGraph() 264 if (getDestination(getArc(node)) == twin in concatenateGraph() 265 || getDestination(getArc(node)) == node) in concatenateGraph() 274 (getDestination(getArc(twin)))) == in concatenateGraph() 276 if (getDestination(getArc(twin)) == node in concatenateGraph() [all …]
|
H A D | graphStats.c | 631 for (arc = getArc(localNode); in countLocalBreakpoints() 1694 while (getArc(node) != NULL) in cleanUpNode() 1695 destroyArc(getArc(node), graph); in cleanUpNode() 1696 while (getArc(twin) != NULL) in cleanUpNode() 1697 destroyArc(getArc(twin), graph); in cleanUpNode() 1790 if (getArc(node) == NULL in destroyShortTips() 2669 node = getDestination(getArc(node)); in followShortPath() 2682 arc1 = getArc(node); in checkNodeForHallidayJunction() 2699 arc1 = getArc(nodeA); in checkNodeForHallidayJunction() 2728 arc1 = getArc(nodeB); in checkNodeForHallidayJunction() [all …]
|
H A D | correctedGraph.c | 704 arc = getArc(source); in remapNodeArcsOntoTarget() 709 arc = getArc(source); in remapNodeArcsOntoTarget() 1351 arc = getArc(twinNode); in foldSymmetricalNode() 1359 arc = getArc(twinNode); in foldSymmetricalNode() 2009 while (getArc(nodeA) != NULL) in concatenateNodesAndVaccinate() 2010 destroyArc(getArc(nodeA), graph); in concatenateNodesAndVaccinate() 2462 activeArc = getArc(current); in isMinorityChoice() 2508 if (getArc(current) == NULL in clipTips() 2521 } else if (getArc(twin) == NULL in clipTips() 2562 if (getArc(current) == NULL in clipTipsHard() [all …]
|
H A D | shortReadPairs.c | 383 while (getArc(node) != NULL) in absorbExtension() 384 destroyArc(getArc(node), graph); in absorbExtension() 387 for (arc = getArc(extension); arc != NULL; arc = getNextArc(arc)) in absorbExtension() 778 for (arc = getArc(current); arc != NULL; in pathIsClear() 806 for (arc = getArc(node); arc != NULL; in pathIsClear() 817 for (arc = getArc(current); arc != NULL; in pathIsClear() 1294 while (getArc(node) != NULL) in absorbExtensionInterRepeat() 1295 destroyArc(getArc(node), graph); in absorbExtensionInterRepeat() 1298 for (arc = getArc(extension); arc != NULL; arc = getNextArc(arc)) in absorbExtensionInterRepeat()
|
H A D | readCoherentGraph.c | 433 while (getArc(bypass) != NULL) in bypass() 434 destroyArc(getArc(bypass), graph); in bypass() 485 for (arc = getArc(next); arc != NULL; arc = getNextArc(arc)) { in bypass() 643 tmpArc = getArc(arrayNode[index]); in getStatusOfUniqueness() 843 tmpArc = getArc(arrayNode[nodeIndex]); in isInterRepeat() 869 tmpArc = getArc(arrayNode[nodeIndex]); in isInterRepeat()
|
H A D | locallyCorrectedGraph.c | 387 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) { in tourBusNode_local() 405 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) in isLocalDeadEnd() 416 for (arc = getArc(getTwinNode(node)); arc != NULL; in isLocalTwinDeadEnd()
|
/dports/biology/velvet/velvet_1.2.10/src/ |
H A D | concatenatedGraph.c | 97 (getDestination(getArc(nodeB)))) == in concatenateStringOfNodes() 100 && getDestination(getArc(nodeB)) != nodeA) { in concatenateStringOfNodes() 102 nodeB = getDestination(getArc(nodeB)); in concatenateStringOfNodes() 110 currentNode = getDestination(getArc(currentNode)); in concatenateStringOfNodes() 181 arc = getArc(currentNode); in concatenateStringOfNodes() 208 (getDestination(getArc(node)))) == in concatenateGraph() 210 if (getDestination(getArc(node)) == twin in concatenateGraph() 211 || getDestination(getArc(node)) == node) in concatenateGraph() 220 (getDestination(getArc(twin)))) == in concatenateGraph() 222 if (getDestination(getArc(twin)) == node in concatenateGraph() [all …]
|
H A D | correctedGraph.c | 479 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints() 489 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints() 682 arc = getArc(source); in remapNodeArcsOntoTarget() 686 arc = getArc(source); in remapNodeArcsOntoTarget() 1341 arc = getArc(twinNode); in foldSymmetricalNode() 1349 arc = getArc(twinNode); in foldSymmetricalNode() 1982 while (getArc(nodeA) != NULL) in concatenateNodesAndVaccinate() 1983 destroyArc(getArc(nodeA), graph); in concatenateNodesAndVaccinate() 2359 for (arc = getArc(node); arc != NULL; in initializeTodoLists() 2467 if (getArc(current) == NULL in clipTipsHard() [all …]
|
H A D | locallyCorrectedGraph.c | 380 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) { in tourBusNode_local() 396 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) in isLocalDeadEnd() 407 for (arc = getArc(getTwinNode(node)); arc != NULL; in isLocalTwinDeadEnd()
|
H A D | readCoherentGraph.c | 381 while (getArc(bypass) != NULL) in bypass() 382 destroyArc(getArc(bypass), graph); in bypass() 434 for (arc = getArc(next); arc != NULL; arc = getNextArc(arc)) { in bypass()
|
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Velvet-1.1.06/ |
H A D | concatenatedGraph.c | 97 (getDestination(getArc(nodeB)))) == in concatenateStringOfNodes() 100 && getDestination(getArc(nodeB)) != nodeA) { in concatenateStringOfNodes() 102 nodeB = getDestination(getArc(nodeB)); in concatenateStringOfNodes() 110 currentNode = getDestination(getArc(currentNode)); in concatenateStringOfNodes() 181 arc = getArc(currentNode); in concatenateStringOfNodes() 208 (getDestination(getArc(node)))) == in concatenateGraph() 210 if (getDestination(getArc(node)) == twin in concatenateGraph() 211 || getDestination(getArc(node)) == node) in concatenateGraph() 220 (getDestination(getArc(twin)))) == in concatenateGraph() 222 if (getDestination(getArc(twin)) == node in concatenateGraph() [all …]
|
H A D | correctedGraph.c | 479 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints() 489 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints() 682 arc = getArc(source); in remapNodeArcsOntoTarget() 686 arc = getArc(source); in remapNodeArcsOntoTarget() 1340 arc = getArc(twinNode); in foldSymmetricalNode() 1348 arc = getArc(twinNode); in foldSymmetricalNode() 1983 while (getArc(nodeA) != NULL) in concatenateNodesAndVaccinate() 1984 destroyArc(getArc(nodeA), graph); in concatenateNodesAndVaccinate() 2360 for (arc = getArc(node); arc != NULL; in initializeTodoLists() 2465 if (getArc(current) == NULL in clipTipsHard() [all …]
|
H A D | locallyCorrectedGraph.c | 381 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) { in tourBusNode_local() 399 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) in isLocalDeadEnd() 410 for (arc = getArc(getTwinNode(node)); arc != NULL; in isLocalTwinDeadEnd()
|
H A D | readCoherentGraph.c | 381 while (getArc(bypass) != NULL) in bypass() 382 destroyArc(getArc(bypass), graph); in bypass() 434 for (arc = getArc(next); arc != NULL; arc = getNextArc(arc)) { in bypass()
|
/dports/audio/atunes/atunes-3.1.2/src/net/sourceforge/atunes/gui/images/ |
H A D | RssImageIcon.java | 53 a.subtract(getArc(pathWidth, cpX, cpY, startX, startY, endX, endY)); in getIconArea() 54 …a.subtract(getArc(pathWidth, cpX - deltaArc2, cpY + deltaArc2, startX, startY + deltaArc2, endX - … in getIconArea() 55 …a.subtract(getArc(pathWidth, cpX - deltaArc3, cpY + deltaArc3, startX, startY + deltaArc3, endX - … in getIconArea() 60 protected static Area getArc(int arcWidth, int c1x, int c1y, int sX, int sY, int eX, int eY) { in getArc() method in RssImageIcon
|
H A D | RssSmallImageIcon.java | 75 a.subtract(RssImageIcon.getArc(pathWidth, cpX, cpY, startX, startY, in getSmallIconArea() 78 .getArc(pathWidth, cpX - deltaArc2, cpY + deltaArc2, startX, in getSmallIconArea() 81 .getArc(pathWidth, cpX - deltaArc3, cpY + deltaArc3, startX, in getSmallIconArea()
|
/dports/www/moinmoin/moin-1.9.11/contrib/TWikiDrawPlugin/src/CH/ifa/draw/figures/ |
H A D | RadiusHandle.java | 28 fRadius = fOwner.getArc(); in invokeStart() 43 Point radius = fOwner.getArc(); in locate()
|
/dports/math/scilab/scilab-6.1.1/scilab/modules/scicos_blocks/src/c/ |
H A D | bouncexy.c | 129 static int getArc(int iAxeUID, scicos_block * block, int row); 340 iArcUID = getArc(iAxeUID, block, row); in pushData() 462 getArc(iAxe, block, i); in getAxe() 477 static int getArc(int iAxeUID, scicos_block * block, int row) in getArc() function
|
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/ISGraph/ |
H A D | ISGraph.cc | 30 Arc* arc = getArc( twin ); in traverse5() 55 Arc* arc = getArc( node ); in traverse3()
|
/dports/devel/itext/itext-4.2.0/core/com/lowagie/text/pdf/codec/wmf/ |
H A D | MetaDo.java | 341 float arc1 = getArc(cx, cy, xstart, ystart); in readAll() 342 float arc2 = getArc(cx, cy, xend, yend); in readAll() 364 float arc1 = getArc(cx, cy, xstart, ystart); in readAll() 365 float arc2 = getArc(cx, cy, xend, yend); in readAll() 397 float arc1 = getArc(cx, cy, xstart, ystart); in readAll() 398 float arc2 = getArc(cx, cy, xend, yend); in readAll() 676 static float getArc(float xCenter, float yCenter, float xDot, float yDot) { in getArc() method in MetaDo
|
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/VelvetAPI/ |
H A D | VUtils.cc | 26 Arc* tmpArc = getArc( node ); in getOutNodes() 37 Arc* tmpArc = getArc( getTwinNode(node) ); in getInNodes()
|
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Common/ |
H A D | MetaGraph.cc | 142 …for( activeArc=getArc(getNodeInGraph(graph, currentIndex)) ; activeArc!=NULL ; activeArc=getNextAr… in dfs() 313 while (getArc(node) != NULL){ in absorbExtensionInterRepeat() 314 destroyArc( getArc(node), graph ); in absorbExtensionInterRepeat() 317 for( Arc* arc = getArc(extension) ; arc != NULL ; arc = getNextArc(arc) ){ in absorbExtensionInterRepeat()
|
/dports/games/emptyepsilon/EmptyEpsilon-EE-2021.06.23/src/ |
H A D | beamTemplate.h | 28 float getArc();
|
/dports/graphics/cenon/Cenon/VHFImport/ChangeLog/ |
H A D | 1997_12.rtf | 13 -getLine, -getArc, -getVertex, getText, getCircle -> state.offset hinzugef�gt\
|
/dports/games/emptyepsilon/EmptyEpsilon-EE-2021.06.23/src/spaceObjects/spaceshipParts/ |
H A D | beamWeapon.h | 19 float getArc();
|