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Searched refs:getArc (Results 1 – 25 of 64) sorted by relevance

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/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-v0.3.1/src/
H A DconcatenatedGraph.c86 while (getArc(nodeA) != NULL) in concatenateNodes()
87 destroyArc(getArc(nodeA), graph); in concatenateNodes()
163 (getDestination(getArc(nodeB)))) == in concatenateStringOfNodes()
168 nodeB = getDestination(getArc(nodeB)); in concatenateStringOfNodes()
235 arc = getArc(currentNode); in concatenateStringOfNodes()
262 (getDestination(getArc(node)))) == in concatenateGraph()
264 if (getDestination(getArc(node)) == twin in concatenateGraph()
265 || getDestination(getArc(node)) == node) in concatenateGraph()
274 (getDestination(getArc(twin)))) == in concatenateGraph()
276 if (getDestination(getArc(twin)) == node in concatenateGraph()
[all …]
H A DgraphStats.c631 for (arc = getArc(localNode); in countLocalBreakpoints()
1694 while (getArc(node) != NULL) in cleanUpNode()
1695 destroyArc(getArc(node), graph); in cleanUpNode()
1696 while (getArc(twin) != NULL) in cleanUpNode()
1697 destroyArc(getArc(twin), graph); in cleanUpNode()
1790 if (getArc(node) == NULL in destroyShortTips()
2669 node = getDestination(getArc(node)); in followShortPath()
2682 arc1 = getArc(node); in checkNodeForHallidayJunction()
2699 arc1 = getArc(nodeA); in checkNodeForHallidayJunction()
2728 arc1 = getArc(nodeB); in checkNodeForHallidayJunction()
[all …]
H A DcorrectedGraph.c704 arc = getArc(source); in remapNodeArcsOntoTarget()
709 arc = getArc(source); in remapNodeArcsOntoTarget()
1351 arc = getArc(twinNode); in foldSymmetricalNode()
1359 arc = getArc(twinNode); in foldSymmetricalNode()
2009 while (getArc(nodeA) != NULL) in concatenateNodesAndVaccinate()
2010 destroyArc(getArc(nodeA), graph); in concatenateNodesAndVaccinate()
2462 activeArc = getArc(current); in isMinorityChoice()
2508 if (getArc(current) == NULL in clipTips()
2521 } else if (getArc(twin) == NULL in clipTips()
2562 if (getArc(current) == NULL in clipTipsHard()
[all …]
H A DshortReadPairs.c383 while (getArc(node) != NULL) in absorbExtension()
384 destroyArc(getArc(node), graph); in absorbExtension()
387 for (arc = getArc(extension); arc != NULL; arc = getNextArc(arc)) in absorbExtension()
778 for (arc = getArc(current); arc != NULL; in pathIsClear()
806 for (arc = getArc(node); arc != NULL; in pathIsClear()
817 for (arc = getArc(current); arc != NULL; in pathIsClear()
1294 while (getArc(node) != NULL) in absorbExtensionInterRepeat()
1295 destroyArc(getArc(node), graph); in absorbExtensionInterRepeat()
1298 for (arc = getArc(extension); arc != NULL; arc = getNextArc(arc)) in absorbExtensionInterRepeat()
H A DreadCoherentGraph.c433 while (getArc(bypass) != NULL) in bypass()
434 destroyArc(getArc(bypass), graph); in bypass()
485 for (arc = getArc(next); arc != NULL; arc = getNextArc(arc)) { in bypass()
643 tmpArc = getArc(arrayNode[index]); in getStatusOfUniqueness()
843 tmpArc = getArc(arrayNode[nodeIndex]); in isInterRepeat()
869 tmpArc = getArc(arrayNode[nodeIndex]); in isInterRepeat()
H A DlocallyCorrectedGraph.c387 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) { in tourBusNode_local()
405 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) in isLocalDeadEnd()
416 for (arc = getArc(getTwinNode(node)); arc != NULL; in isLocalTwinDeadEnd()
/dports/biology/velvet/velvet_1.2.10/src/
H A DconcatenatedGraph.c97 (getDestination(getArc(nodeB)))) == in concatenateStringOfNodes()
100 && getDestination(getArc(nodeB)) != nodeA) { in concatenateStringOfNodes()
102 nodeB = getDestination(getArc(nodeB)); in concatenateStringOfNodes()
110 currentNode = getDestination(getArc(currentNode)); in concatenateStringOfNodes()
181 arc = getArc(currentNode); in concatenateStringOfNodes()
208 (getDestination(getArc(node)))) == in concatenateGraph()
210 if (getDestination(getArc(node)) == twin in concatenateGraph()
211 || getDestination(getArc(node)) == node) in concatenateGraph()
220 (getDestination(getArc(twin)))) == in concatenateGraph()
222 if (getDestination(getArc(twin)) == node in concatenateGraph()
[all …]
H A DcorrectedGraph.c479 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints()
489 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints()
682 arc = getArc(source); in remapNodeArcsOntoTarget()
686 arc = getArc(source); in remapNodeArcsOntoTarget()
1341 arc = getArc(twinNode); in foldSymmetricalNode()
1349 arc = getArc(twinNode); in foldSymmetricalNode()
1982 while (getArc(nodeA) != NULL) in concatenateNodesAndVaccinate()
1983 destroyArc(getArc(nodeA), graph); in concatenateNodesAndVaccinate()
2359 for (arc = getArc(node); arc != NULL; in initializeTodoLists()
2467 if (getArc(current) == NULL in clipTipsHard()
[all …]
H A DlocallyCorrectedGraph.c380 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) { in tourBusNode_local()
396 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) in isLocalDeadEnd()
407 for (arc = getArc(getTwinNode(node)); arc != NULL; in isLocalTwinDeadEnd()
H A DreadCoherentGraph.c381 while (getArc(bypass) != NULL) in bypass()
382 destroyArc(getArc(bypass), graph); in bypass()
434 for (arc = getArc(next); arc != NULL; arc = getNextArc(arc)) { in bypass()
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Velvet-1.1.06/
H A DconcatenatedGraph.c97 (getDestination(getArc(nodeB)))) == in concatenateStringOfNodes()
100 && getDestination(getArc(nodeB)) != nodeA) { in concatenateStringOfNodes()
102 nodeB = getDestination(getArc(nodeB)); in concatenateStringOfNodes()
110 currentNode = getDestination(getArc(currentNode)); in concatenateStringOfNodes()
181 arc = getArc(currentNode); in concatenateStringOfNodes()
208 (getDestination(getArc(node)))) == in concatenateGraph()
210 if (getDestination(getArc(node)) == twin in concatenateGraph()
211 || getDestination(getArc(node)) == node) in concatenateGraph()
220 (getDestination(getArc(twin)))) == in concatenateGraph()
222 if (getDestination(getArc(twin)) == node in concatenateGraph()
[all …]
H A DcorrectedGraph.c479 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints()
489 for (arc = getArc(node); arc != NULL; in determineEligibleStartingPoints()
682 arc = getArc(source); in remapNodeArcsOntoTarget()
686 arc = getArc(source); in remapNodeArcsOntoTarget()
1340 arc = getArc(twinNode); in foldSymmetricalNode()
1348 arc = getArc(twinNode); in foldSymmetricalNode()
1983 while (getArc(nodeA) != NULL) in concatenateNodesAndVaccinate()
1984 destroyArc(getArc(nodeA), graph); in concatenateNodesAndVaccinate()
2360 for (arc = getArc(node); arc != NULL; in initializeTodoLists()
2465 if (getArc(current) == NULL in clipTipsHard()
[all …]
H A DlocallyCorrectedGraph.c381 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) { in tourBusNode_local()
399 for (arc = getArc(node); arc != NULL; arc = getNextArc(arc)) in isLocalDeadEnd()
410 for (arc = getArc(getTwinNode(node)); arc != NULL; in isLocalTwinDeadEnd()
H A DreadCoherentGraph.c381 while (getArc(bypass) != NULL) in bypass()
382 destroyArc(getArc(bypass), graph); in bypass()
434 for (arc = getArc(next); arc != NULL; arc = getNextArc(arc)) { in bypass()
/dports/audio/atunes/atunes-3.1.2/src/net/sourceforge/atunes/gui/images/
H A DRssImageIcon.java53 a.subtract(getArc(pathWidth, cpX, cpY, startX, startY, endX, endY)); in getIconArea()
54 …a.subtract(getArc(pathWidth, cpX - deltaArc2, cpY + deltaArc2, startX, startY + deltaArc2, endX - … in getIconArea()
55 …a.subtract(getArc(pathWidth, cpX - deltaArc3, cpY + deltaArc3, startX, startY + deltaArc3, endX - … in getIconArea()
60 protected static Area getArc(int arcWidth, int c1x, int c1y, int sX, int sY, int eX, int eY) { in getArc() method in RssImageIcon
H A DRssSmallImageIcon.java75 a.subtract(RssImageIcon.getArc(pathWidth, cpX, cpY, startX, startY, in getSmallIconArea()
78 .getArc(pathWidth, cpX - deltaArc2, cpY + deltaArc2, startX, in getSmallIconArea()
81 .getArc(pathWidth, cpX - deltaArc3, cpY + deltaArc3, startX, in getSmallIconArea()
/dports/www/moinmoin/moin-1.9.11/contrib/TWikiDrawPlugin/src/CH/ifa/draw/figures/
H A DRadiusHandle.java28 fRadius = fOwner.getArc(); in invokeStart()
43 Point radius = fOwner.getArc(); in locate()
/dports/math/scilab/scilab-6.1.1/scilab/modules/scicos_blocks/src/c/
H A Dbouncexy.c129 static int getArc(int iAxeUID, scicos_block * block, int row);
340 iArcUID = getArc(iAxeUID, block, row); in pushData()
462 getArc(iAxe, block, i); in getAxe()
477 static int getArc(int iAxeUID, scicos_block * block, int row) in getArc() function
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/ISGraph/
H A DISGraph.cc30 Arc* arc = getArc( twin ); in traverse5()
55 Arc* arc = getArc( node ); in traverse3()
/dports/devel/itext/itext-4.2.0/core/com/lowagie/text/pdf/codec/wmf/
H A DMetaDo.java341 float arc1 = getArc(cx, cy, xstart, ystart); in readAll()
342 float arc2 = getArc(cx, cy, xend, yend); in readAll()
364 float arc1 = getArc(cx, cy, xstart, ystart); in readAll()
365 float arc2 = getArc(cx, cy, xend, yend); in readAll()
397 float arc1 = getArc(cx, cy, xstart, ystart); in readAll()
398 float arc2 = getArc(cx, cy, xend, yend); in readAll()
676 static float getArc(float xCenter, float yCenter, float xDot, float yDot) { in getArc() method in MetaDo
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/VelvetAPI/
H A DVUtils.cc26 Arc* tmpArc = getArc( node ); in getOutNodes()
37 Arc* tmpArc = getArc( getTwinNode(node) ); in getInNodes()
/dports/biology/velvet/velvet_1.2.10/contrib/MetaVelvet-1.2.01/Common/
H A DMetaGraph.cc142 …for( activeArc=getArc(getNodeInGraph(graph, currentIndex)) ; activeArc!=NULL ; activeArc=getNextAr… in dfs()
313 while (getArc(node) != NULL){ in absorbExtensionInterRepeat()
314 destroyArc( getArc(node), graph ); in absorbExtensionInterRepeat()
317 for( Arc* arc = getArc(extension) ; arc != NULL ; arc = getNextArc(arc) ){ in absorbExtensionInterRepeat()
/dports/games/emptyepsilon/EmptyEpsilon-EE-2021.06.23/src/
H A DbeamTemplate.h28 float getArc();
/dports/graphics/cenon/Cenon/VHFImport/ChangeLog/
H A D1997_12.rtf13 -getLine, -getArc, -getVertex, getText, getCircle -> state.offset hinzugef�gt\
/dports/games/emptyepsilon/EmptyEpsilon-EE-2021.06.23/src/spaceObjects/spaceshipParts/
H A DbeamWeapon.h19 float getArc();

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