Home
last modified time | relevance | path

Searched refs:getNMixtures (Results 1 – 23 of 23) sorted by relevance

/dports/graphics/opencv/opencv-4.5.3/contrib/modules/cudabgsegm/src/
H A Dmog2.cpp92 int getNMixtures() const CV_OVERRIDE { return constantsHost_.nmixtures_; } in getNMixtures() function in __anonc4941b290111::CV_FINAL
234 weight_.create(frameSize.height * getNMixtures(), frameSize_.width, CV_32FC1); in initialize()
235 variance_.create(frameSize.height * getNMixtures(), frameSize_.width, CV_32FC1); in initialize()
236 mean_.create(frameSize.height * getNMixtures(), frameSize_.width, CV_32FC(work_ch)); in initialize()
H A Dmog.cpp88 int getNMixtures() const CV_OVERRIDE { return nmixtures_; } in getNMixtures() function in __anoneeadd9370111::CV_FINAL
/dports/biology/iqtree/IQ-TREE-2.0.6/model/
H A Dmodelpomomixture.cpp143 int m, nmix = getNMixtures(), num_states_2 = num_states*num_states; in decomposeRateMatrix()
227 return num_states * getNMixtures(); in get_num_states_total()
259 ASSERT(mixture < getNMixtures()); in computeTransMatrix()
H A Dmodelmixture.cpp1407 checkpoint->startStruct("ModelMixture" + convertIntToString(getNMixtures())); in startCheckpoint()
1414 int nmix = getNMixtures(); in saveCheckpoint()
1434 int nmix = getNMixtures(); in restoreCheckpoint()
1451 ASSERT(mixture < getNMixtures()); in getStateFrequency()
1459 int mix = getNMixtures(); in getStateFrequency()
1480 ASSERT(mixture < getNMixtures()); in computeTransMatrix()
1486 ASSERT(mixture < getNMixtures()); in computeTransDerv()
1552 size_t nmix = getNMixtures(); in optimizeWeights()
H A Dmodelfactorymixlen.cpp107 ASSERT(model->getNMixtures() == site_rate->getNRate()); in sortClassesByTreeLength()
109 int nmix = model->getNMixtures(); in sortClassesByTreeLength()
H A Dmodelmixture.h95 virtual int getNMixtures() {return size(); } in getNMixtures() function
H A Dmodelsubst.h96 virtual int getNMixtures() { return 1; } in getNMixtures() function
H A Dmodelfactory.cpp716 if (fused_mix_rate && model->isMixture()) num_rate_cats = model->getNMixtures(); in ModelFactory()
876 if (model->getNMixtures() != site_rate->getNRate()) in ModelFactory()
881 int mix, nmix = model->getNMixtures(); in ModelFactory()
/dports/graphics/opencv/opencv-4.5.3/contrib/modules/cudabgsegm/include/opencv2/
H A Dcudabgsegm.hpp97 CV_WRAP virtual int getNMixtures() const = 0;
/dports/graphics/opencv/opencv-4.5.3/modules/video/include/opencv2/video/
H A Dbackground_segm.hpp102 CV_WRAP virtual int getNMixtures() const = 0;
/dports/graphics/opencv/opencv-4.5.3/contrib/modules/bgsegm/include/opencv2/
H A Dbgsegm.hpp68 CV_WRAP virtual int getNMixtures() const = 0;
/dports/biology/iqtree/IQ-TREE-2.0.6/tree/
H A Dphylotree.cpp963 scale_block_size *= model->getNMixtures(); in getMemoryRequired()
970 … mem_size = aln->num_states * (aln->STATE_UNKNOWN+1) * model->getNMixtures() * sizeof(double); in getMemoryRequired()
1031 block_size *= model->getNMixtures(); in getMemoryRequired()
1032 scale_size *= model->getNMixtures(); in getMemoryRequired()
1035 uint64_t tip_partial_lh_size = aln->num_states * (aln->STATE_UNKNOWN+1) * model->getNMixtures(); in getMemoryRequired()
1291 ncat *= getModel()->getNMixtures(); in getNumLhCat()
1296 return getModel()->getNMixtures(); in getNumLhCat()
1307 if (!model_factory->fused_mix_rate) ncat *= model->getNMixtures(); in transformPatternLhCat()
1352 size_t m, nmixture = getModel()->getNMixtures(); in computePatternLhCat()
1390 size_t ptn, nptn = getAlnNPattern(), m, nmixture = getModel()->getNMixtures(); in computePatternStateFreq()
[all …]
H A Dphylokernelsafe.h107 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computePartialLikelihoodEigenSIMD()
113 size_t tip_block = nstates * model->getNMixtures(); in computePartialLikelihoodEigenSIMD()
586 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodDervEigenSIMD()
588 size_t tip_block = nstates * model->getNMixtures(); in computeLikelihoodDervEigenSIMD()
878 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodBranchEigenSIMD()
883 size_t tip_block = nstates * model->getNMixtures(); in computeLikelihoodBranchEigenSIMD()
1238 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodFromBufferEigenSIMD()
H A Dphylokernelnew.h873 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computePartialInfo()
875 size_t tip_block = nstates * model->getNMixtures(); in computePartialInfo()
1286 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computePartialLikelihoodSIMD()
2001 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodBufferSIMD()
2004 size_t tip_block = nstates * model->getNMixtures(); in computeLikelihoodBufferSIMD()
2190 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodDervSIMD()
2631 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodBranchSIMD()
2634 size_t tip_block = nstates * model->getNMixtures(); in computeLikelihoodBranchSIMD()
3128 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodFromBufferSIMD()
3370 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures(); in computeLikelihoodDervMixlenSIMD()
[all …]
H A Dphylokernelmixture.h50 size_t nmixture = model->getNMixtures(); in computeMixturePartialLikelihoodEigenSIMD()
483 size_t nmixture = model->getNMixtures(); in computeMixtureLikelihoodDervEigenSIMD()
749 size_t nmixture = model->getNMixtures(); in computeMixtureLikelihoodBranchEigenSIMD()
1066 size_t nmixture = model->getNMixtures(); in computeMixtureLikelihoodFromBufferEigenSIMD()
H A Dphylotreesse.cpp527 int m, x, nmixtures = model->getNMixtures(); in computeTipPartialLikelihood()
1544 …del_factory->fused_mix_rate) ? site_rate->getNRate() : site_rate->getNRate()*model->getNMixtures(); in computeMarginalAncestralState()
H A Dphylokernelnonrev.h61 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures();
582 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures();
1057 size_t ncat_mix = (model_factory->fused_mix_rate) ? ncat : ncat*model->getNMixtures();
H A Dphylosupertreeplen.cpp1638 (((*it)->model_factory->fused_mix_rate)? 1 : (*it)->getModel()->getNMixtures()); in initializeAllPartialLh()
1644 (((*it)->model_factory->fused_mix_rate)? 1 : (*it)->getModel()->getNMixtures()); in initializeAllPartialLh()
1757 …al_lh_size = (*it)->aln->num_states * ((*it)->aln->STATE_UNKNOWN+1) * (*it)->model->getNMixtures(); in initializeAllPartialLh()
H A Dphylotreemixlen.cpp769 size_t nmixture = model->getNMixtures(); in computeFuncDerv()
H A Dphylokernelmixrate.h52 ASSERT(ncat == model->getNMixtures()); in computeMixratePartialLikelihoodEigenSIMD()
/dports/graphics/opencv/opencv-4.5.3/contrib/modules/bgsegm/src/
H A Dbgfg_gaussmix.cpp133 virtual int getNMixtures() const CV_OVERRIDE { return nmixtures; } in getNMixtures() function in cv::bgsegm::CV_FINAL
/dports/graphics/opencv/opencv-4.5.3/modules/video/src/
H A Dbgfg_gaussmix2.cpp242 virtual int getNMixtures() const CV_OVERRIDE { return nmixtures; } in getNMixtures() function in cv::CV_FINAL
/dports/biology/iqtree/IQ-TREE-2.0.6/main/
H A Dphyloanalysis.cpp449 int nmix = mmodel->getNMixtures(); in reportModel()
1942 ncat = iqtree.getModel()->getNMixtures(); in printMiscInfo()