Searched refs:get_read_ids (Results 1 – 11 of 11) sorted by relevance
19 self.assertEqual(len(f5.get_read_ids()), 1)20 self.assertEqual(single_read_id, f5.get_read_ids()[0])27 self.assertTrue(len(f5.get_read_ids()) >= 1)32 raw_data = f5.get_read(f5.get_read_ids()[0]).get_raw_data()
31 self.assertEqual(sorted(read_ids), sorted(multi_f5.get_read_ids()))57 read0 = multi_f5.get_read(multi_f5.get_read_ids()[0])75 read0 = multi_f5.get_read(multi_f5.get_read_ids()[0])97 read0 = multi_f5.get_read(multi_f5.get_read_ids()[0])112 read0 = multi_f5.get_read(multi_f5.get_read_ids()[0])
65 self.assertEqual(len(self.read_set), len(output_f5.get_read_ids()))91 readlist = multi_file.get_read_ids()
91 read_id = input_f5.get_read_ids()[0]105 read_id = input_f5.get_read_ids()[0]
38 …ected_files = sorted([os.path.join(self.save_path, "{}", i + '.fast5') for i in f5.get_read_ids()])
51 read_ids = set(fast5_in.get_read_ids())
71 self.assertEqual(len(input_files), len(multi_f5.get_read_ids()))
73 selected_reads = read_ids.intersection(fast5_file.get_read_ids())75 selected_reads = fast5_file.get_read_ids()279 reads_present = set(output_f5.get_read_ids())313 read_ids = input_f5.get_read_ids()
29 def get_read_ids(self): member in MultiFast5File
48 def get_read_ids(self): member in Fast5File
23 def get_read_ids(self): member in AbstractFast5