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Searched refs:gsl_vector_safe_alloc (Results 1 – 7 of 7) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dlmm.cpp1380 gsl_vector *y = gsl_vector_safe_alloc(U->size1); in AnalyzeGene()
1383 gsl_vector *ab = gsl_vector_safe_alloc(n_index); in AnalyzeGene()
1485 gsl_vector *ab = gsl_vector_safe_alloc(n_index); in Analyze()
1898 gsl_vector *ab = gsl_vector_safe_alloc(6); in MatrixCalcLR()
2109 gsl_vector *ab = gsl_vector_safe_alloc(n_index); in CalcLambda()
2136 gsl_vector *ab = gsl_vector_safe_alloc(n_index); in CalcPve()
2163 gsl_vector *ab = gsl_vector_safe_alloc(n_index); in CalcLmmVgVeBeta()
2253 gsl_vector *x = gsl_vector_safe_alloc(U->size1); in AnalyzeBimbamGXE()
2257 gsl_vector *ab = gsl_vector_safe_alloc(n_index); in AnalyzeBimbamGXE()
2403 gsl_vector *x = gsl_vector_safe_alloc(U->size1); in AnalyzePlinkGXE()
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H A Dlogistic.cpp139 gsl_vector *gn = gsl_vector_safe_alloc(npar); // gn in wgsl_mixed_optim_hessian()
228 gsl_vector *stBeta = gsl_vector_safe_alloc(npar); // Direction to move. in logistic_mixed_fit()
230 gsl_vector *myG = gsl_vector_safe_alloc(npar); // Gradient. in logistic_mixed_fit()
231 gsl_vector *tau = gsl_vector_safe_alloc(npar); // tau for QR. in logistic_mixed_fit()
460 gsl_vector *stBeta = gsl_vector_safe_alloc(npar); // Direction to move. in logistic_cat_fit()
462 gsl_vector *myG = gsl_vector_safe_alloc(npar); // Gradient. in logistic_cat_fit()
463 gsl_vector *tau = gsl_vector_safe_alloc(npar); // tau for QR. in logistic_cat_fit()
599 gsl_vector *gn = gsl_vector_safe_alloc(npar); // gn. in wgsl_cont_optim_hessian()
678 gsl_vector *stBeta = gsl_vector_safe_alloc(npar); // Direction to move. in logistic_cont_fit()
680 gsl_vector *myG = gsl_vector_safe_alloc(npar); // Gradient. in logistic_cont_fit()
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H A Dgemma.cpp1737 gsl_vector *eval = gsl_vector_safe_alloc(Y->size1); in BatchRun()
1786 gsl_vector *beta = gsl_vector_safe_alloc(W->size2); in BatchRun()
1961 gsl_vector *y = gsl_vector_safe_alloc(cPar.ni_test); in BatchRun()
2000 gsl_vector *q = gsl_vector_safe_alloc(cPar.n_vc); in BatchRun()
2001 gsl_vector *s = gsl_vector_safe_alloc(cPar.n_vc + 1); in BatchRun()
2116 gsl_vector *q = gsl_vector_safe_alloc(cPar.n_vc); in BatchRun()
2256 gsl_vector *q = gsl_vector_safe_alloc(cPar.n_vc); in BatchRun()
2566 gsl_vector *env = gsl_vector_safe_alloc(Y->size1); in BatchRun()
2856 gsl_vector *y = gsl_vector_safe_alloc(cPar.ni_test); in BatchRun()
2883 gsl_vector *eval = gsl_vector_safe_alloc(y->size); in BatchRun()
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H A Dmathfunc.cpp149 gsl_vector *w = gsl_vector_safe_alloc(G->size1); in CenterMatrix()
150 gsl_vector *Gw = gsl_vector_safe_alloc(G->size1); in CenterMatrix()
183 gsl_vector *Gw = gsl_vector_safe_alloc(G->size1); in CenterMatrix()
332 gsl_vector *eigenvalues = gsl_vector_safe_alloc(G->size1); in getEigenValues()
457 gsl_vector *Wty = gsl_vector_safe_alloc(W->size2); in CenterVector()
458 gsl_vector *WtWiWty = gsl_vector_safe_alloc(W->size2); in CenterVector()
H A Dgemma_io.cpp653 gsl_vector *genotype = gsl_vector_safe_alloc(W->size1); in ReadFile_geno()
657 gsl_vector *Wtx = gsl_vector_safe_alloc(W->size2); in ReadFile_geno()
658 gsl_vector *WtWiWtx = gsl_vector_safe_alloc(W->size2); in ReadFile_geno()
879 gsl_vector *Wtx = gsl_vector_safe_alloc(W->size2); in ReadFile_bed()
880 gsl_vector *WtWiWtx = gsl_vector_safe_alloc(W->size2); in ReadFile_bed()
1417 gsl_vector *geno = gsl_vector_safe_alloc(ni_total); in BimbamKin()
1599 gsl_vector *geno = gsl_vector_safe_alloc(ni_total); in PlinkKin()
2759 gsl_vector *geno = gsl_vector_safe_alloc(ni_test); in BimbamKinUncentered()
2762 gsl_vector *Wtx = gsl_vector_safe_alloc(W->size2); in BimbamKinUncentered()
2952 gsl_vector *geno = gsl_vector_safe_alloc(ni_test); in PlinkKin()
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H A Ddebug.h75 gsl_vector *gsl_vector_safe_alloc(size_t n);
H A Ddebug.cpp286 gsl_vector *gsl_vector_safe_alloc(size_t n) { in gsl_vector_safe_alloc() function