/dports/biology/seqan/seqan-library-2.4.0/include/seqan/align/ |
H A D | local_alignment_banded_waterman_eggert_impl.h | 86 TSize hi_row = len2;// + 1; in _alignBandedSmithWaterman() local 87 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWaterman() 89 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWaterman() 224 TSize hi_row = length(seqV);// + 1; in _alignBandedSmithWatermanDeclump() local 225 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWatermanDeclump() 226 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWatermanDeclump() 487 TSize hi_row = length(seqV) + 1; in _initLocalAlignmentFinder() local 489 if (len0 - lowerDiag < hi_row) hi_row = static_cast<TSize>(len0 - lowerDiag); in _initLocalAlignmentFinder() 490 TSize height = hi_row - lo_row + 1; in _initLocalAlignmentFinder()
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/include/seqan/align/ |
H A D | local_alignment_banded_waterman_eggert_impl.h | 86 TSize hi_row = len2;// + 1; in _alignBandedSmithWaterman() local 87 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWaterman() 89 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWaterman() 224 TSize hi_row = length(seqV);// + 1; in _alignBandedSmithWatermanDeclump() local 225 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWatermanDeclump() 226 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWatermanDeclump() 487 TSize hi_row = length(seqV) + 1; in _initLocalAlignmentFinder() local 489 if (len0 - lowerDiag < hi_row) hi_row = static_cast<TSize>(len0 - lowerDiag); in _initLocalAlignmentFinder() 490 TSize height = hi_row - lo_row + 1; in _initLocalAlignmentFinder()
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/dports/biology/pbseqan/seqan-21d95d737d8decb5cc3693b9065d81e831e7f57d/include/seqan/align/ |
H A D | local_alignment_banded_waterman_eggert_impl.h | 86 TSize hi_row = len2;// + 1; in _alignBandedSmithWaterman() local 87 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWaterman() 89 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWaterman() 224 TSize hi_row = length(seqV);// + 1; in _alignBandedSmithWatermanDeclump() local 225 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWatermanDeclump() 226 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWatermanDeclump() 487 TSize hi_row = length(seqV) + 1; in _initLocalAlignmentFinder() local 489 if (len0 - lowerDiag < hi_row) hi_row = static_cast<TSize>(len0 - lowerDiag); in _initLocalAlignmentFinder() 490 TSize height = hi_row - lo_row + 1; in _initLocalAlignmentFinder()
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/dports/benchmarks/iozone/iozone3_491/src/current/ |
H A D | libbif.c | 119 char hi_row; member 134 char hi_row; member 149 char hi_row; member 271 intrec.hi_row=(char)s_row&0xff; 311 floatrec.hi_row=(char)(s_row&0xff); 398 labelrec.hi_row=(char)(s_row&0xff);
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/dports/biology/seqan1/seqan-1.3.1/seqan/align/ |
H A D | align_local_dynprog_banded.h | 57 TSize hi_row = length(value(str, 1)) + 1; in _initLocalAlignmentFinder() local 59 if (len0 - lowerDiag < hi_row) hi_row = static_cast<TSize>(len0 - lowerDiag); in _initLocalAlignmentFinder() 60 TSize height = hi_row - lo_row + 1; in _initLocalAlignmentFinder() 198 TSize hi_row = length(value(str, 1));// + 1; in _alignBandedSmithWatermanDeclump() local 199 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWatermanDeclump() 200 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWatermanDeclump() 354 TSize hi_row = len2;// + 1; in _alignBandedSmithWaterman() local 355 if (len1 - diagL < hi_row) hi_row = static_cast<TSize>(len1 - diagL); in _alignBandedSmithWaterman() 357 TSize height = hi_row - lo_row + 1; in _alignBandedSmithWaterman()
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/dports/biology/seqan1/seqan-1.3.1/seqan/graph_align/ |
H A D | graph_align_banded_smith_waterman_clump.h | 172 TSize hi_row = len2; in _alignBandedSmithWaterman() local 173 if (len1 - diagL < hi_row) hi_row = len1 - diagL; in _alignBandedSmithWaterman() 174 TSize height = hi_row - lo_row; in _alignBandedSmithWaterman() 325 TSize hi_row = (len1 - diag1 < len2) ? len1 - diag1 : len2; in _localAlignment() local 326 TSize height = hi_row - lo_row; in _localAlignment()
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H A D | graph_align_banded_needleman_wunsch.h | 195 TSize hi_row = len2; in _alignBandedNeedlemanWunsch() local 196 if (len1 - diagL < hi_row) hi_row = len1 - diagL; in _alignBandedNeedlemanWunsch() 197 TSize height = hi_row - lo_row; in _alignBandedNeedlemanWunsch() 305 TSize hi_row = len2; in _alignBandedNeedlemanWunsch() local 306 if (len1 - diagL < hi_row) hi_row = len1 - diagL; in _alignBandedNeedlemanWunsch() 307 TSize height = hi_row - lo_row; in _alignBandedNeedlemanWunsch()
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H A D | graph_align_banded_gotoh.h | 178 TSize hi_row = len2; in _alignBandedGotoh() local 179 if (len1 - diagL < hi_row) hi_row = len1 - diagL; in _alignBandedGotoh() 180 TSize height = hi_row - lo_row; in _alignBandedGotoh()
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/dports/java/sablevm-classpath/sablevm-classpath-1.13/javax/swing/plaf/basic/ |
H A D | BasicTableUI.java | 171 int hi_row = table.rowAtPoint(curr); in updateSelection() local 173 if (lo_row != -1 && hi_row != -1) in updateSelection() 177 rowModel.addSelectionInterval(lo_row, hi_row); in updateSelection() 179 rowModel.setSelectionInterval(lo_row, hi_row); in updateSelection()
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/dports/biology/seqan1/seqan-1.3.1/apps/stellar/ |
H A D | stellar_extension.h | 256 TSize hi_row = len2; in _align_banded_nw_best_ends() local 257 if (len1 - diagL < hi_row) hi_row = len1 - diagL; in _align_banded_nw_best_ends() 258 TSize height = hi_row - lo_row; in _align_banded_nw_best_ends()
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/dports/lang/gcc6-aux/gcc-6-20180516/libjava/classpath/javax/swing/plaf/basic/ |
H A D | BasicTableUI.java | 207 int hi_row = table.rowAtPoint(curr); in updateSelection() local 209 if (lo_row != -1 && hi_row != -1) in updateSelection() 213 rowModel.addSelectionInterval(lo_row, hi_row); in updateSelection() 215 rowModel.setSelectionInterval(lo_row, hi_row); in updateSelection()
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/dports/lang/gcc48/gcc-4.8.5/libjava/classpath/javax/swing/plaf/basic/ |
H A D | BasicTableUI.java | 207 int hi_row = table.rowAtPoint(curr); in updateSelection() local 209 if (lo_row != -1 && hi_row != -1) in updateSelection() 213 rowModel.addSelectionInterval(lo_row, hi_row); in updateSelection() 215 rowModel.setSelectionInterval(lo_row, hi_row); in updateSelection()
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/dports/lang/gnat_util/gcc-6-20180516/libjava/classpath/javax/swing/plaf/basic/ |
H A D | BasicTableUI.java | 207 int hi_row = table.rowAtPoint(curr); in updateSelection() local 209 if (lo_row != -1 && hi_row != -1) in updateSelection() 213 rowModel.addSelectionInterval(lo_row, hi_row); in updateSelection() 215 rowModel.setSelectionInterval(lo_row, hi_row); in updateSelection()
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/dports/devel/arm-none-eabi-gcc492/gcc-4.9.2/libjava/classpath/javax/swing/plaf/basic/ |
H A D | BasicTableUI.java | 207 int hi_row = table.rowAtPoint(curr); in updateSelection() local 209 if (lo_row != -1 && hi_row != -1) in updateSelection() 213 rowModel.addSelectionInterval(lo_row, hi_row); in updateSelection() 215 rowModel.setSelectionInterval(lo_row, hi_row); in updateSelection()
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/dports/devel/mingw32-gcc/gcc-4.8.1/libjava/classpath/javax/swing/plaf/basic/ |
H A D | BasicTableUI.java | 207 int hi_row = table.rowAtPoint(curr); in updateSelection() local 209 if (lo_row != -1 && hi_row != -1) in updateSelection() 213 rowModel.addSelectionInterval(lo_row, hi_row); in updateSelection() 215 rowModel.setSelectionInterval(lo_row, hi_row); in updateSelection()
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/stellar/ |
H A D | stellar_extension.h | 270 TSize hi_row = len2; in _align_banded_nw_best_ends() local 271 if (len1 - diagL < hi_row) hi_row = len1 - diagL; in _align_banded_nw_best_ends() 272 TSize height = hi_row - lo_row; in _align_banded_nw_best_ends()
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/dports/x11/xterm/xterm-370/ |
H A D | util.c | 380 int hi_row = screen->bot_marg; in adjustHiliteOnFwdScroll() local 400 screen->endH.row - amount <= hi_row))) { in adjustHiliteOnFwdScroll() 426 hi_row)); in adjustHiliteOnFwdScroll() 429 } else if (screen->startH.row <= hi_row && screen->endH.row > hi_row) { in adjustHiliteOnFwdScroll() 453 int hi_row = screen->bot_marg; in adjustHiliteOnBakScroll() local 466 if (screen->endH.row >= hi_row in adjustHiliteOnBakScroll() 467 && screen->endH.row + amount > hi_row) { in adjustHiliteOnBakScroll() 473 hi_row - amount, in adjustHiliteOnBakScroll() 475 screen->endH.row = hi_row - amount; in adjustHiliteOnBakScroll() 485 hi_row)); in adjustHiliteOnBakScroll() [all …]
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/dports/math/symmetrica/symmetrica-e29c85915f368d6fb2f89d703b6695ff29ab9eae/src/ |
H A D | hiccup.c | 846 INT trev_lo_col,lo_row,hi_col,hi_row; local 880 hi_row= -1; 922 hi_row=i; 932 axel_ll=ll=hi_row; /* do not remove 935 if (hi_row > -1) /* position of k+1 already located */ 943 C_I_I(S_T_IJ(new,hi_row,hi_col),k);
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/dports/lang/mit-scheme/mit-scheme-9.2/src/microcode/ |
H A D | ntscreen.c | 2295 int hi_row, int hi_col) in clear_screen_rectangle() argument 2307 row < hi_row; in clear_screen_rectangle() 2321 rect.bottom = ((hi_row * screen->yChar) - screen->yOffset); in clear_screen_rectangle() 3443 int hi_row, int hi_col) in Screen_CR_to_RECT() argument 3448 rect->bottom = ((hi_row * screen->yChar) - screen->yOffset); in Screen_CR_to_RECT()
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/dports/biology/seqan-apps/seqan-seqan-v2.4.0/apps/splazers/ |
H A D | razers_spliced.h | 1311 TSize hi_row = len2; in _alignBandedNeedlemanWunsch() local 1312 if (len1 - diagL < hi_row) hi_row = len1 - diagL; in _alignBandedNeedlemanWunsch() 1313 TSize height = hi_row - lo_row; in _alignBandedNeedlemanWunsch()
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