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Searched refs:indicator_pheno (Results 1 – 6 of 6) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dprdt.cpp51 indicator_pheno = cPar.indicator_pheno; in CopyFromParam()
461 for (vector<int>::size_type i1 = 0; i1 < indicator_pheno.size(); ++i1) { in MvnormPrdt()
469 for (vector<int>::size_type i2 = 0; i2 < indicator_pheno.size(); ++i2) { in MvnormPrdt()
475 if (indicator_pheno[i2][j2] == 1) { in MvnormPrdt()
476 if (indicator_pheno[i1][j1] == 1) { in MvnormPrdt()
492 if (indicator_pheno[i1][j1] == 1) { in MvnormPrdt()
509 for (vector<int>::size_type i = 0; i < indicator_pheno.size(); ++i) { in MvnormPrdt()
515 if (indicator_pheno[i][j] == 1) { in MvnormPrdt()
532 for (vector<int>::size_type i = 0; i < indicator_pheno.size(); ++i) { in MvnormPrdt()
538 if (indicator_pheno[i][j] == 0) { in MvnormPrdt()
H A Dparam.cpp207 for (size_t i = 0; i < indicator_pheno.size(); i++) { in ReadFiles()
209 for (size_t j = 0; j < indicator_pheno[i].size(); j++) { in ReadFiles()
210 if (indicator_pheno[i][j] == 0) { in ReadFiles()
447 for (size_t i = 0; i < indicator_pheno.size(); i++) { in ReadFiles()
449 for (size_t j = 0; j < indicator_pheno[i].size(); j++) { in ReadFiles()
450 if (indicator_pheno[i][j] == 0) { in ReadFiles()
1051 for (size_t i = 0; i < indicator_pheno.size(); i++) { in CheckData()
1070 for (size_t j = 0; j < indicator_pheno[i].size(); j++) { in CheckData()
1071 if (indicator_pheno[i][j] == 0) { in CheckData()
1996 for (size_t i = 0; i < indicator_pheno.size(); i++) { in ProcessCvtPhen()
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H A Dgemma_io.h46 bool ReadFile_fam(const string &file_fam, vector<vector<int>> &indicator_pheno,
56 vector<vector<int>> &indicator_pheno,
182 vector<vector<int>> &indicator_pheno,
H A Dprdt.h43 vector<vector<int>> indicator_pheno; variable
H A Dparam.h279 vector<vector<int>> indicator_pheno; variable
H A Dgemma_io.cpp383 vector<vector<int>> &indicator_pheno, in ReadFile_pheno() argument
387 indicator_pheno.clear(); in ReadFile_pheno()
432 indicator_pheno.push_back(ind_pheno_row); in ReadFile_pheno()
555 bool ReadFile_fam(const string &file_fam, vector<vector<int>> &indicator_pheno, in ReadFile_fam() argument
559 indicator_pheno.clear(); in ReadFile_fam()
621 indicator_pheno.push_back(ind_pheno_row); in ReadFile_fam()