Searched refs:input_missing_geno_char (Results 1 – 5 of 5) sorted by relevance
1208 const char input_missing_geno_char = *g_input_missing_geno_ptr; in LoadPvar() local1243 acgtm_bool_table[ctou32(input_missing_geno_char)] = 1; in LoadPvar()1551 …_alt_char_ct == 1) && ((linebuf_iter[0] == '.') || (linebuf_iter[0] == input_missing_geno_char))) { in LoadPvar()1647 if (geno_char == input_missing_geno_char) { in LoadPvar()1672 if (geno_char == input_missing_geno_char) { in LoadPvar()1697 if (geno_char == input_missing_geno_char) { in LoadPvar()
395 const char input_missing_geno_char = *g_input_missing_geno_ptr; in UpdateVarAlleles() local446 if ((old_slen1 == 1) && (old_allele1_start[0] == input_missing_geno_char)) { in UpdateVarAlleles()449 if ((old_slen2 == 1) && (old_allele2_start[0] == input_missing_geno_char)) { in UpdateVarAlleles()457 if ((new_slen1 == 1) && (new_allele1_start[0] == input_missing_geno_char)) { in UpdateVarAlleles()460 if ((new_slen2 == 1) && (new_allele2_start[0] == input_missing_geno_char)) { in UpdateVarAlleles()
3565 char input_missing_geno_char = '0'; local5728 input_missing_geno_char = ExtractCharParam(cur_modif);5729 if (unlikely(ctou32(input_missing_geno_char) <= ' ')) {9799 g_input_missing_geno_ptr = &(g_one_char_strs[2 * ctou32(input_missing_geno_char)]);9855 …kely((output_missing_geno_char != '.') && (output_missing_geno_char != input_missing_geno_char))) {
4125 const char input_missing_geno_char = *g_input_missing_geno_ptr; variable4178 if ((allele_char == '.') || (allele_char == input_missing_geno_char)) {
74 const char input_missing_geno_char = *g_input_missing_geno_ptr; variable157 if (allele_char == input_missing_geno_char) {