Searched refs:intQuals (Results 1 – 6 of 6) sorted by relevance
| /dports/biology/hisat2/hisat2-2.2.1/ |
| H A D | pat.h | 115 intQuals(intQuals_), in PatternParams()
127 bool intQuals; // true -> qualities are space-separated numbers member
928 bool intQuals,
941 first_(true), solexa64_(p.solexa64), phred64_(p.phred64), intQuals_(p.intQuals) in FastaPatternSource()
1036 intQuals_(p.intQuals), in TabbedPatternSource()
1122 intQuals_(p.intQuals) { } in QseqPatternSource()
1369 intQuals_(p.intQuals), in FastqPatternSource()
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| H A D | pat.cpp | 657 bool intQuals, argument
664 if (intQuals) {
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| /dports/biology/bowtie/bowtie-1.3.1/ |
| H A D | pat.h | 68 intQuals(intQuals_), in PatternParams()
81 bool intQuals; // true -> qualities are space-separated numbers member
545 bool intQuals = false) :
553 intQuals_(intQuals) { } in CFilePatternSource()
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| /dports/biology/bowtie2/bowtie2-2.4.4/ |
| H A D | read_qseq.cpp | 174 if (pp_.intQuals) { in parse()
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| H A D | pat.h | 95 intQuals(intQuals_), in PatternParams()
115 bool intQuals; // true -> qualities are space-separated numbers member
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| H A D | pat.cpp | 1139 if (pp_.intQuals) { in parse()
1604 if (pp_.intQuals) { in parse()
1872 if (pp_.intQuals) { in parse()
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