/dports/biology/jalview/jalview/test/jalview/schemes/ |
H A D | FeatureColourTest.java | 57 assertFalse(fc.isColourByLabel()); in testConstructors() 66 assertFalse(fc.isColourByLabel()); in testConstructors() 85 assertFalse(fc1.isColourByLabel()); in testCopyConstructor() 98 assertFalse(fc1.isColourByLabel()); in testCopyConstructor() 118 assertFalse(fc1.isColourByLabel()); in testCopyConstructor() 137 assertTrue(fc1.isColourByLabel()); in testCopyConstructor() 149 assertTrue(fc1.isColourByLabel()); in testCopyConstructor() 438 assertTrue(fc.isColourByLabel()); in testParseJalviewFeatureColour() 446 assertTrue(fc.isColourByLabel()); in testParseJalviewFeatureColour() 455 assertTrue(fc.isColourByLabel()); in testParseJalviewFeatureColour() [all …]
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/dports/biology/jalview/jalview/src/jalview/schemes/ |
H A D | FeatureColour.java | 486 setColourByLabel(fc.isColourByLabel()); in FeatureColour() 585 public boolean isColourByLabel() in isColourByLabel() method in FeatureColour 695 if (isColourByLabel()) in getColor() 787 return (!isColourByLabel() && !isGraduatedColour()); in isSimpleColour() 813 else if (isColourByLabel()) in toJalviewFormat() 940 else if (isColourByLabel()) in getDescription() 956 if (isColourByLabel()) in getDescription()
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/dports/biology/jalview/jalview/src/jalview/appletgui/ |
H A D | FeatureRenderer.java | 102 private boolean isColourByLabel, isGcol; field in FeatureRenderer.FeatureColourPanel 127 if (isColourByLabel = newcol.isColourByLabel()) in updateColor() 154 if (isColourByLabel) in paint()
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H A D | FeatureSettings.java | 772 if (col.isColourByLabel()) in updateColor() 808 if (col.isColourByLabel()) in paint()
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H A D | FeatureColourChooser.java | 156 colourFromLabel.setState(cs.isColourByLabel()); in init()
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/dports/biology/jalview/jalview/src/jalview/api/ |
H A D | FeatureColourI.java | 80 boolean isColourByLabel(); in isColourByLabel() method
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/dports/biology/jalview/jalview/test/jalview/gui/ |
H A D | FeatureSettingsTest.java | 142 assertTrue(fc.isColourByLabel()); in testSaveLoad() 149 assertTrue(fc.isColourByLabel()); in testSaveLoad()
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/dports/biology/jalview/jalview/test/jalview/ext/ensembl/ |
H A D | EnsemblGeneTest.java | 296 assertTrue(fc.getFeatureColour("exon").isColourByLabel()); in testGetFeatureColourScheme() 297 assertTrue(fc.getFeatureColour("coding_exon").isColourByLabel()); in testGetFeatureColourScheme()
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/dports/biology/jalview/jalview/src/jalview/viewmodel/seqfeatures/ |
H A D | FeatureRendererSettings.java | 107 if (val.isGraduatedColour() || val.isColourByLabel()) // why this test? in FeatureRendererSettings()
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/dports/biology/jalview/jalview/src/jalview/xml/binding/jalview/ |
H A D | JalviewUserColours.java | 488 public Boolean isColourByLabel() { in isColourByLabel() method in JalviewUserColours.Colour
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H A D | JalviewModelType.java | 1128 public Boolean isColourByLabel() { in isColourByLabel() method in JalviewModelType.FeatureSettings.Setting
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H A D | JalviewModel.java | 1222 public Boolean isColourByLabel() { in isColourByLabel() method in JalviewModel.FeatureSettings.Setting
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/dports/biology/jalview/jalview/src/jalview/ext/ensembl/ |
H A D | EnsemblGene.java | 646 public boolean isColourByLabel() in getFeatureColourScheme()
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/dports/biology/jalview/jalview/src/jalview/gui/ |
H A D | FeatureSettings.java | 1568 else if (!gcol.isColourByLabel()) in renderGraduatedColor() 1583 if (gcol.isColourByLabel()) in renderGraduatedColor() 2139 if (gcol.isColourByLabel()) in paintIcon()
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H A D | FeatureTypeSettings.java | 275 if (fc.isColourByLabel()) in updateColoursTab()
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/dports/biology/jalview/jalview/test/jalview/project/ |
H A D | Jalview2xmlTests.java | 1011 assertTrue(fc.isColourByLabel()); in testSaveLoadFeatureColoursAndFilters() 1018 assertTrue(fc.isColourByLabel()); in testSaveLoadFeatureColoursAndFilters()
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/dports/biology/jalview/jalview/src/jalview/project/ |
H A D | Jalview2XML.java | 1546 setting.setColourByLabel(fcol.isColourByLabel()); in saveState() 5114 if (setting.isColourByLabel() != null) 5116 gc.setColourByLabel(setting.isColourByLabel()); 6359 col.setColourByLabel(fcol.isColourByLabel()); 6611 if (colourModel.isColourByLabel() != null) 6614 colourModel.isColourByLabel().booleanValue());
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