Searched refs:isMixlen (Results 1 – 9 of 9) sorted by relevance
89 virtual bool isMixlen() { return !initializing_mixlen; } in isMixlen() function
503 virtual bool isMixlen() { return false; } in isMixlen() function
2015 if (isMixlen()) { in computeLikelihoodBufferSIMD()2297 if (isMixlen()) { in computeLikelihoodDervSIMD()2323 if (isMixlen()) { in computeLikelihoodDervSIMD()2499 if (isMixlen()) { in computeLikelihoodDervSIMD()
359 if (tree->isMixlen()) { in copyPhyloTreeMixlen()363 if (tree->isMixlen()) { in copyPhyloTreeMixlen()848 if (isMixlen()) { in getBufferPartialLhSize()
844 if (isMixlen()) { in initCandidateTreeSet()
18 if (!tree->isMixlen()) { in ModelFactoryMixlen()
1690 if (phylo_tree->isMixlen() && isFused() && !phylo_tree->getRate()->getFixParams()) { in optimizeWithEM()
613 if (tree.isMixlen()) { in reportTree()667 if (tree.isMixlen()) in reportTree()714 if (tree.isMixlen()) in reportTree()2204 if (posRateHeterotachy(iqtree->aln->model_name) != string::npos && !iqtree->isMixlen()) { in runTreeReconstruction()2242 if (iqtree->getRate()->isHeterotachy() && !iqtree->isMixlen()) { in runTreeReconstruction()2357 if (iqtree->isMixlen()) in runTreeReconstruction()2821 if (tree->getRate()->isHeterotachy() && !tree->isMixlen()) { in runMultipleTreeReconstruction()
614 if (iqtree->isMixlen()) in computeFastMLTree()