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Searched refs:isStdio (Results 1 – 6 of 6) sorted by relevance

/dports/biology/bbmap/bbmap/current/assemble/
H A DPostfilter.java180 if(showStats && out!=null && !FileFormat.isStdio(out)){ in process()
H A DKmerCompressor.java253 …null && FileFormat.isFasta(ReadWrite.rawExtension(outContigs)) && !FileFormat.isStdio(outContigs)){ in process()
H A DTadpole.java760 …Mode && FileFormat.isFasta(ReadWrite.rawExtension(outContigs)) && !FileFormat.isStdio(outContigs)){ in process()
/dports/biology/bbmap/bbmap/current/fileIO/
H A DFileFormat.java563 public static boolean isStdio(String s){ in isStdio() method in FileFormat
/dports/biology/bbmap/bbmap/current/jgi/
H A DTestFormat.java375 if(!FileFormat.isStdio(khistFile) && new File(khistFile).exists()){ in printNucleotideTop()
H A DCoveragePileup.java437 if(useStreamer && !FileFormat.isStdio(in1)){ in process()