Searched refs:isofrac (Results 1 – 2 of 2) sorted by relevance
167 float isofrac=0.01; variable905 isofrac=0.05; in processOptions()1050 isofrac=(float)s.asDouble(); in processOptions()1051 …if(isofrac>=1) GError("Miminum isoform fraction (-f coefficient: %f) needs to be less than 1\n",is… in processOptions()1053 else if(mergeMode) isofrac=0.01; in processOptions()
22 extern float isofrac;9085 if(included || cov<isofrac*maxcov) { in parse_trf_long()9224 if(included || cov<isofrac*maxcov) { in parse_trf()10851 if(jd.nreads_good*100/sumjunc<isofrac) { in good_merge_junc()13866 if(cov<isofrac*maxcov->val) return(false); in is_exon_above_frac()14301 if(longreads && isofrac<intronfrac) intronfrac=isofrac; in print_predcluster()14694 float isofraclong=isofrac; in print_predcluster()14696 if(pred[n]->cov>CHI_THR) isofraclong=isofrac*DROP; in print_predcluster()14701 if(!pred[n]->t_eq && (longunder || (!longreads && (pred[n]->cov<isofrac*usedcov || in print_predcluster()15026 if(!pred[n]->t_eq && ((pred[m]->exons.Count()>1 && pred[n]->cov<isofrac*pred[m]->cov) || in printMergeResults()[all …]