Searched refs:isunitig (Results 1 – 2 of 2) sorted by relevance
168 bool isunitig=true; variable
23 extern bool isunitig;306 …if(strand==readlist[n]->strand && (!isunitig || (unitig_cov>0) == readlist[n]->unitig)) match=exon… in processRead()373 if(isunitig) readlist[n]->unitig=true; // treat unitig reads differently when -U is set in processRead()