Searched refs:keep_indi_file (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/gcta/gcta_1.26.0_src/ |
| H A D | grm.cpp | 480 void gcta::manipulate_grm(string grm_file, string keep_indi_file, string remove_indi_file, string s… in manipulate_grm() argument
488 if (!keep_indi_file.empty()) keep_indi(keep_indi_file); in manipulate_grm()
494 if (grm_cutoff>-1.0 || !keep_indi_file.empty() || !remove_indi_file.empty()) { in manipulate_grm()
509 void gcta::save_grm(string grm_file, string keep_indi_file, string remove_indi_file, string sex_fil… in save_grm() argument
511 …manipulate_grm(grm_file, keep_indi_file, remove_indi_file, sex_file, grm_cutoff, adj_grm_fac, dosa… in save_grm()
577 void gcta::grm_bK(string grm_file, string keep_indi_file, string remove_indi_file, double threshold… in grm_bK() argument
582 if (!keep_indi_file.empty()) keep_indi(keep_indi_file); in grm_bK()
584 if (!keep_indi_file.empty() || !remove_indi_file.empty()) { in grm_bK()
608 void gcta::pca(string grm_file, string keep_indi_file, string remove_indi_file, double grm_cutoff, … in pca() argument
610 …manipulate_grm(grm_file, keep_indi_file, remove_indi_file, "", grm_cutoff, -2.0, -2, merge_grm_fla… in pca()
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| H A D | gcta.h | 101 …void save_grm(string grm_file, string keep_indi_file, string remove_indi_file, string sex_file, do…
102 …void pca(string grm_file, string keep_indi_file, string remove_indi_file, double grm_cutoff, bool …
106 …void grm_bK(string grm_file, string keep_indi_file, string remove_indi_file, double threshold, boo…
109 …var_file, string covar_file, string qGE_file, string GE_file, string keep_indi_file, string remove…
110 …void HE_reg(string grm_file, string phen_file, string keep_indi_file, string remove_indi_file, int…
120 …ile, string phen_file, string qcovar_file, string covar_file, string keep_indi_file, string remove…
228 …void manipulate_grm(string grm_file, string keep_indi_file, string remove_indi_file, string sex_fi…
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| H A D | bivar_reml.cpp | 15 …ile, string phen_file, string qcovar_file, string covar_file, string keep_indi_file, string remove… in fit_bivar_reml() argument
56 if (!keep_indi_file.empty()) keep_indi(keep_indi_file); in fit_bivar_reml()
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| H A D | est_hsq.cpp | 171 …var_file, string covar_file, string qGE_file, string GE_file, string keep_indi_file, string remove… in fit_reml() argument
221 if (!keep_indi_file.empty()) keep_indi(keep_indi_file); in fit_reml()
1483 void gcta::HE_reg(string grm_file, string phen_file, string keep_indi_file, string remove_indi_file… in HE_reg() argument
1493 if (!keep_indi_file.empty()) keep_indi(keep_indi_file); in HE_reg()
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