| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/htslib/ |
| H A D | kstring.h | 369 static inline int kputll(long long c, kstring_t *s) in kputll() function
385 return kputll(c, s); in kputl()
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| /dports/biology/py-pysam/pysam-0.18.0/htslib/htslib/ |
| H A D | kstring.h | 369 static inline int kputll(long long c, kstring_t *s) in kputll() function
385 return kputll(c, s); in kputl()
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| /dports/biology/htslib/htslib-1.14/htslib/ |
| H A D | kstring.h | 369 static inline int kputll(long long c, kstring_t *s) in kputll() function
385 return kputll(c, s); in kputl()
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| /dports/biology/py-pysam/pysam-0.18.0/samtools/ |
| H A D | bam2depth.c | 106 kputll(i+1, ks); in zero_region()
197 kputll(i+1, &dh->ks); in add_depth()
268 kputll(i+1, &dh->ks); in add_depth()
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| H A D | bam2depth.c.pysam.c | 108 kputll(i+1, ks); in zero_region()
199 kputll(i+1, &dh->ks); in add_depth()
270 kputll(i+1, &dh->ks); in add_depth()
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| /dports/biology/samtools/samtools-1.14/ |
| H A D | bam2depth.c | 106 kputll(i+1, ks); in zero_region()
197 kputll(i+1, &dh->ks); in add_depth()
268 kputll(i+1, &dh->ks); in add_depth()
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| /dports/biology/freebayes/freebayes-1.3.5/contrib/htslib/ |
| H A D | README.large_positions.md | 197 [new] kputll()
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| H A D | sam.c | 1611 e |= kputll(ln, &str) < 0; in sam_hdr_create()
3303 r |= kputll(c->pos + 1, str); r |= kputc_('\t', str); // pos in sam_format1_append()
3319 r |= kputll(c->mpos + 1, str); r |= kputc_('\t', str); // mate pos in sam_format1_append()
3320 r |= kputll(c->isize, str); r |= kputc_('\t', str); // template len in sam_format1_append()
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| H A D | vcf.c | 3099 kputc('\t', s); kputll(v->pos + 1, s); // POS in vcf_format()
3157 …case BCF_BT_INT64: if ( z->v1.i==bcf_int64_missing ) kputc('.', s); else kputll(z->v1.i, s); break; in vcf_format()
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| /dports/biology/htslib/htslib-1.14/ |
| H A D | README.large_positions.md | 197 [new] kputll()
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| H A D | sam.c | 2008 e |= kputll(ln, &str) < 0; in sam_hdr_create()
4077 r |= kputll(c->pos + 1, str); r |= kputc_('\t', str); // pos in sam_format1_append()
4093 r |= kputll(c->mpos + 1, str); r |= kputc_('\t', str); // mate pos in sam_format1_append()
4094 r |= kputll(c->isize, str); r |= kputc_('\t', str); // template len in sam_format1_append()
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| H A D | vcf.c | 3143 kputc('\t', s); kputll(v->pos + 1, s); // POS in vcf_format()
3201 …case BCF_BT_INT64: if ( z->v1.i==bcf_int64_missing ) kputc('.', s); else kputll(z->v1.i, s); break; in vcf_format()
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| /dports/biology/py-pysam/pysam-0.18.0/htslib/ |
| H A D | sam.c | 2008 e |= kputll(ln, &str) < 0; in sam_hdr_create()
4077 r |= kputll(c->pos + 1, str); r |= kputc_('\t', str); // pos in sam_format1_append()
4093 r |= kputll(c->mpos + 1, str); r |= kputc_('\t', str); // mate pos in sam_format1_append()
4094 r |= kputll(c->isize, str); r |= kputc_('\t', str); // template len in sam_format1_append()
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| H A D | vcf.c | 3143 kputc('\t', s); kputll(v->pos + 1, s); // POS in vcf_format()
3201 …case BCF_BT_INT64: if ( z->v1.i==bcf_int64_missing ) kputc('.', s); else kputll(z->v1.i, s); break; in vcf_format()
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