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Searched refs:lcl (Results 1 – 25 of 2053) sorted by relevance

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/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/readers/
H A D	idmapper_builtin_config.ini	`4 62750345 = chr1 lcl\|1 5 62750359 = chr2 lcl\|2 6 62750360 = chr3 lcl\|3 7 62750804 = chr4 lcl\|4 8 62750805 = chr5 lcl\|5 9 62750806 = chr6 lcl\|6 10 62750807 = chr7 lcl\|7 11 62750808 = chr8 lcl\|8 12 62750809 = chr9 lcl\|9 13 62750810 = chr10 lcl\|10 [all …]`
H A D	idmapper_builtin_config.inl	`5 62750345 = chr1 lcl\|1 \n\ 6 62750359 = chr2 lcl\|2 \n\ 7 62750360 = chr3 lcl\|3 \n\ 8 62750804 = chr4 lcl\|4 \n\ 9 62750805 = chr5 lcl\|5 \n\ 10 62750806 = chr6 lcl\|6 \n\ 11 62750807 = chr7 lcl\|7 \n\ 12 62750808 = chr8 lcl\|8 \n\ 13 62750809 = chr9 lcl\|9 \n\ 14 62750810 = chr10 lcl\|10 \n\ [all …]`
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/readers/
H A D	idmapper_builtin_config.ini	`4 62750345 = chr1 lcl\|1 5 62750359 = chr2 lcl\|2 6 62750360 = chr3 lcl\|3 7 62750804 = chr4 lcl\|4 8 62750805 = chr5 lcl\|5 9 62750806 = chr6 lcl\|6 10 62750807 = chr7 lcl\|7 11 62750808 = chr8 lcl\|8 12 62750809 = chr9 lcl\|9 13 62750810 = chr10 lcl\|10 [all …]`
H A D	idmapper_builtin_config.inl	`5 62750345 = chr1 lcl\|1 \n\ 6 62750359 = chr2 lcl\|2 \n\ 7 62750360 = chr3 lcl\|3 \n\ 8 62750804 = chr4 lcl\|4 \n\ 9 62750805 = chr5 lcl\|5 \n\ 10 62750806 = chr6 lcl\|6 \n\ 11 62750807 = chr7 lcl\|7 \n\ 12 62750808 = chr8 lcl\|8 \n\ 13 62750809 = chr9 lcl\|9 \n\ 14 62750810 = chr10 lcl\|10 \n\ [all …]`
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/writers/unit_test/gff3writer_test_cases/
H A D	modevidence-gnomon.annot.asn	`108 "lcl\|RNA_SEQ_COLLAPSE.41349.18", 124 "lcl\|RNA_SEQ_COLLAPSE.41349.100", 125 "lcl\|RNA_SEQ_COLLAPSE.41349.101", 126 "lcl\|RNA_SEQ_COLLAPSE.41349.102", 127 "lcl\|RNA_SEQ_COLLAPSE.41349.103", 128 "lcl\|RNA_SEQ_COLLAPSE.41349.104", 132 "lcl\|RNA_SEQ_COLLAPSE.41349.11", 141 "lcl\|RNA_SEQ_COLLAPSE.41349.13", 143 "lcl\|RNA_SEQ_COLLAPSE.41349.15", 145 "lcl\|RNA_SEQ_COLLAPSE.41349.17", [all …]`
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/app/asnval/TestRes.asnval/tests/test1/test-cases/
H A D	ALACA30300-sqn.golden	1 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ALACA30300:<1-672] [lcl\|ALACA30… 4 …ve identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ALLEW121106:<1-672] [lcl\|ALLEW12… 7 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ALLOA59698:<1-672] [lcl\|ALLOA59… 10 …ve identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ANGUW104349:<1-672] [lcl\|ANGUW10… 13 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ANIASP040:<1-672] [lcl\|ANIASP04… 16 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ARANSP006:<1-672] [lcl\|ARANSP00… 19 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ARCASP007:<1-658] [lcl\|ARCASP00… 23 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ARNHA29158:<1-672] [lcl\|ARNHA29… 26 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|ASTAA09043:<1-672] [lcl\|ASTAA09… 41 …ave identical intervals, but labels differ FEATURE: Gene: ND4 [lcl\|COGGSP075:<1-602] [lcl\|COGGSP07… [all …]
H A D	asnfail_all-sqn.golden	1 …_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|accJF701686:<1->1282] [lcl\|accJF7… 18 …[SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|AL_2:<1->1282] [lcl\|AL_2: raw… 50 …[SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|IT_2:<1->1282] [lcl\|IT_2: raw… 54 …SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|FR-R1:<1->1279] [lcl\|FR-R1: ra… 66 …SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|FR-V3:<1->1282] [lcl\|FR-V3: ra… 94 …[SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|TN-H:<1->1282] [lcl\|TN-H: raw… 106 …[SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|MI_2:<1->1282] [lcl\|MI_2: raw… 110 … [SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|MN:<1->1282] [lcl\|MN: raw, d… 122 …[SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|NC-5:<1->1282] [lcl\|NC-5: raw… 240 …[SEQ_FEAT.FeatContentDup] Duplicate feature FEATURE: Gene: rbcL [lcl\|EST:<1->1282] [lcl\|EST: raw, … [all …]
H A D	reject-sqn.golden	1 ERROR: valid [SEQ_INST.MolNuclAcid] Bioseq.mol is type na BIOSEQ: lcl\|seq_1: raw, na len= 336 7 …[1] or protein should be partial FEATURE: CDS: [lcl\|seq_1:1-336] [lcl\|seq_1: raw, na len= 336] ->… 8 …_FEAT.NoStop] Missing stop codon FEATURE: CDS: [lcl\|seq_1:1-336] [lcl\|seq_1: raw, na len= 336] ->… 9 … (code 1) and BioSource (code 0) FEATURE: CDS: [lcl\|seq_1:1-336] [lcl\|seq_1: raw, na len= 336] ->… 10 … in nuc-prot set with nucleotide FEATURE: CDS: [lcl\|seq_1:1-336] [lcl\|seq_1: raw, na len= 336] ->… 11 ERROR: valid [SEQ_INST.MolNuclAcid] Bioseq.mol is type na BIOSEQ: lcl\|seq_2: raw, na len= 336 14 …[1] or protein should be partial FEATURE: CDS: [lcl\|seq_2:1-336] [lcl\|seq_2: raw, na len= 336] ->… 15 …_FEAT.NoStop] Missing stop codon FEATURE: CDS: [lcl\|seq_2:1-336] [lcl\|seq_2: raw, na len= 336] ->… 16 … (code 1) and BioSource (code 0) FEATURE: CDS: [lcl\|seq_2:1-336] [lcl\|seq_2: raw, na len= 336] ->… 17 …ioseq from multiple CDS features FEATURE: CDS: [lcl\|seq_2:1-336] [lcl\|seq_2: raw, na len= 336] ->… [all …]
H A D	SQD-1475-sqn.golden	1464 WARNING: valid [SEQ_INST.TerminalGap] Gap at beginning of sequence BIOSEQ: lcl\|contig732: delta, dn… 1930 WARNING: valid [SEQ_INST.TerminalGap] Gap at beginning of sequence BIOSEQ: lcl\|contig964: delta, dn… 2078 WARNING: valid [SEQ_INST.TerminalGap] Gap at beginning of sequence BIOSEQ: lcl\|contig1037: delta, d… 2948 WARNING: valid [SEQ_INST.TerminalGap] Gap at beginning of sequence BIOSEQ: lcl\|contig1470: delta, d… 2986 WARNING: valid [SEQ_INST.TerminalGap] Gap at beginning of sequence BIOSEQ: lcl\|contig1487: delta, d… 3336 WARNING: valid [SEQ_INST.TerminalGap] Gap at beginning of sequence BIOSEQ: lcl\|contig1661: delta, d… 5601 WARNING: valid [SEQ_INST.TerminalNs] N at beginning of sequence BIOSEQ: lcl\|contig2791: raw, dna le… 8106 WARNING: valid [SEQ_INST.TerminalNs] N at beginning of sequence BIOSEQ: lcl\|contig4037: delta, dna … 8693 WARNING: valid [SEQ_INST.TerminalNs] N at beginning of sequence BIOSEQ: lcl\|contig4330: raw, dna le… 8940 WARNING: valid [SEQ_INST.TerminalNs] N at beginning of sequence BIOSEQ: lcl\|contig4453: delta, dna … [all …]
H A D	GB-3513-sqn.golden	2 …ture partials conflict FEATURE: CDS: RNA polymerase beta subunit [lcl\|SE_38:<1-4] [lcl\|SE_38: raw,… 4 …translation length [1] FEATURE: CDS: RNA polymerase beta subunit [lcl\|SE_38:<1-4] [lcl\|SE_38: raw,… 5 …end is labeled partial FEATURE: CDS: RNA polymerase beta subunit [lcl\|SE_38:<1-4] [lcl\|SE_38: raw,… 7 … multiple CDS features FEATURE: CDS: RNA polymerase beta subunit [lcl\|SE_38:<1-4] [lcl\|SE_38: raw,… 8 …rotein has neither end FEATURE: CDS: RNA polymerase beta subunit [lcl\|SE_38:<1-4] [lcl\|SE_38: raw,… 28 …ForType] Invalid feature for a protein Bioseq. FEATURE: CDS: [lcl\|Dta_2_5:c>309-213] [lcl\|Dta_2_5… 29 …t at start AND is not at consensus splice site FEATURE: CDS: [lcl\|Dta_2_5:c>309-213] [lcl\|Dta_2_5… 30 …d [SEQ_FEAT.Range] Location: SeqLoc [lcl\|Dta_2_5:c>309-213] out of range FEATURE: CDS: [lcl\|Dta_2… 31 …] Feature on protein indicates negative strand FEATURE: CDS: [lcl\|Dta_2_5:c>309-213] [lcl\|Dta_2_5… 32 ERROR: valid [SEQ_FEAT.CdTransFail] Unable to translate FEATURE: CDS: [lcl\|Dta_2_5:c>309-213] [lcl… [all …]
/dports/dns/libbind/libbind-6.0/irs/
H A D	lcl.c	`56 struct lcl_p lcl; in irs_lcl_acc() local 65 if (!(lcl = memget(sizeof lcl))) { in irs_lcl_acc() 70 memset(lcl, 0x5e, sizeof lcl); in irs_lcl_acc() 71 lcl->res = NULL; in irs_lcl_acc() 113 return (lcl->res); in lcl_res_get() 121 if (lcl->res && lcl->free_res) { in lcl_res_set() 123 (lcl->free_res)(lcl->res); in lcl_res_set() 126 lcl->res = res; in lcl_res_set() 134 if (lcl) { in lcl_close() 136 (*lcl->free_res)(lcl->res); in lcl_close() [all …]`
/dports/astro/p5-Astro-satpass/Astro-satpass-0.122/t/
H A D	parse_time.t	`47 lcl( '2009070216', 0, 0, 16, 2, 6, 2009 ); 49 lcl( '20090702', 0, 0, 0, 2, 6, 2009 ); 51 lcl( '200907', 0, 0, 0, 1, 6, 2009 ); 53 lcl( '2009', 0, 0, 0, 1, 0, 2009 ); 62 lcl( '20090102', 0, 0, 0, 2, 0, 2009 ); 64 lcl( '200901', 0, 0, 0, 1, 0, 2009 ); 82 lcl( '2009/1/2', 0, 0, 0, 2, 0, 2009 ); 84 lcl( '2009/1', 0, 0, 0, 1, 0, 2009 ); 86 lcl( '2009', 0, 0, 0, 1, 0, 2009 ); 95 lcl( '09/1/2', 0, 0, 0, 2, 0, 2009 ); [all …]`
/dports/math/vtk9/VTK-9.1.0/ThirdParty/vtkm/vtkvtkm/vtk-m/vtkm/thirdparty/lcl/vtkmlcl/lcl/
H A D	Shapes.h	17 namespace lcl 130 lclGenericCellShapeMacroCase(lcl::ShapeId::VERTEX, lcl::Vertex, call); \ 131 lclGenericCellShapeMacroCase(lcl::ShapeId::LINE, lcl::Line, call); \ 132 lclGenericCellShapeMacroCase(lcl::ShapeId::TRIANGLE, lcl::Triangle, call); \ 133 lclGenericCellShapeMacroCase(lcl::ShapeId::POLYGON, lcl::Polygon, call); \ 134 lclGenericCellShapeMacroCase(lcl::ShapeId::PIXEL, lcl::Pixel, call); \ 135 lclGenericCellShapeMacroCase(lcl::ShapeId::QUAD, lcl::Quad, call); \ 136 lclGenericCellShapeMacroCase(lcl::ShapeId::TETRA, lcl::Tetra, call); \ 137 lclGenericCellShapeMacroCase(lcl::ShapeId::VOXEL, lcl::Voxel, call); \ 138 lclGenericCellShapeMacroCase(lcl::ShapeId::HEXAHEDRON, lcl::Hexahedron, call); \ [all …]
/dports/devel/splint/splint-3.1.2/imports/
H A D	Makefile.am	`10 assert.lcl assert.lcs ctype.lcl ctype.lcs errno.lcl errno.lcs \ 11 limits.lcl limits.lcs locale.lcl locale.lcs math.lcl math.lcs \ 12 setjmp.lcl setjmp.lcs signal.lcl signal.lcs stdarg.lcl stdarg.lcs \ 13 stdio.lcl stdio.lcs stdlib.lcl stdlib.lcs string.lcl string.lcs \ 14 strings.lcl strings.lcs time.lcl time.lcs`
/dports/editors/lazarus/lazarus/lcl/interfaces/customdrawn/
H A D	cocoautils.pas	`149 lcl.Left:=round(ns.origin.x); 150 lcl.Top:=round(ns.origin.y); 160 lcl.Bottom:=Round(lcl.Top+ns.size.height); 165 ns.origin.x:=lcl.Left; 166 ns.origin.y:=lcl.Top; 167 ns.size.width:=lcl.Right-lcl.Left; 168 ns.size.height:=lcl.Bottom-lcl.Top; 173 ns.origin.x:=lcl.left; 174 ns.origin.y:=ParentHeight-(lcl.bottom-lcl.Top)-lcl.Top; 175 ns.size.width:=lcl.Right-lcl.Left; [all …]`
/dports/editors/lazarus-devel/lazarus-6df7e8756882f7d7f28f662011ee72f21746c580/lcl/interfaces/customdrawn/
H A D	cocoautils.pas	`149 lcl.Left:=round(ns.origin.x); 150 lcl.Top:=round(ns.origin.y); 160 lcl.Bottom:=Round(lcl.Top+ns.size.height); 165 ns.origin.x:=lcl.Left; 166 ns.origin.y:=lcl.Top; 167 ns.size.width:=lcl.Right-lcl.Left; 168 ns.size.height:=lcl.Bottom-lcl.Top; 173 ns.origin.x:=lcl.left; 174 ns.origin.y:=ParentHeight-(lcl.bottom-lcl.Top)-lcl.Top; 175 ns.size.width:=lcl.Right-lcl.Left; [all …]`
/dports/editors/lazarus-qt5/lazarus/lcl/interfaces/customdrawn/
H A D	cocoautils.pas	`149 lcl.Left:=round(ns.origin.x); 150 lcl.Top:=round(ns.origin.y); 160 lcl.Bottom:=Round(lcl.Top+ns.size.height); 165 ns.origin.x:=lcl.Left; 166 ns.origin.y:=lcl.Top; 167 ns.size.width:=lcl.Right-lcl.Left; 168 ns.size.height:=lcl.Bottom-lcl.Top; 173 ns.origin.x:=lcl.left; 174 ns.origin.y:=ParentHeight-(lcl.bottom-lcl.Top)-lcl.Top; 175 ns.size.width:=lcl.Right-lcl.Left; [all …]`
/dports/editors/lazarus-qt5-devel/lazarus-6df7e8756882f7d7f28f662011ee72f21746c580/lcl/interfaces/customdrawn/
H A D	cocoautils.pas	`149 lcl.Left:=round(ns.origin.x); 150 lcl.Top:=round(ns.origin.y); 160 lcl.Bottom:=Round(lcl.Top+ns.size.height); 165 ns.origin.x:=lcl.Left; 166 ns.origin.y:=lcl.Top; 167 ns.size.width:=lcl.Right-lcl.Left; 168 ns.size.height:=lcl.Bottom-lcl.Top; 173 ns.origin.x:=lcl.left; 174 ns.origin.y:=ParentHeight-(lcl.bottom-lcl.Top)-lcl.Top; 175 ns.size.width:=lcl.Right-lcl.Left; [all …]`
/dports/dns/libbind/libbind-6.0/isc/
H A D	logging.c	177 log_channel_list lcl; in log_close_debug_channels() local 181 for (lcl = lc->categories[i]; lcl != NULL; lcl = lcl->next) in log_close_debug_channels() 241 log_channel_list lcl; in log_check() local 257 if (lcl == NULL) { in log_check() 262 for ( /* nothing /; lcl != NULL; lcl = lcl->next) { in log_check() 302 if (lcl == NULL) { in log_vwrite() 353 for ( / nothing */; lcl != NULL; lcl = lcl->next) { in log_vwrite() 476 for (lcl = lc->categories[i]; lcl != NULL; lcl = lcl_next) { in log_free_context() 497 if (lcl == NULL) { in log_add_channel() 519 lcl != NULL; in log_remove_channel() [all …]
/dports/editors/lazarus-devel/examples/dockmanager/patches/
H A D	IdeFix_big.patch	`415 …ideintf/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../lcl/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../… 1108 // lcl 1606 Index: lcl/include/control.inc 1608 --- lcl/include/control.inc (revision 23296) 1609 +++ lcl/include/control.inc (working copy) 1686 Index: lcl/include/toolbutton.inc 1688 --- lcl/include/toolbutton.inc (revision 23296) 1689 +++ lcl/include/toolbutton.inc (working copy) 1698 Index: lcl/include/wincontrol.inc 1700 --- lcl/include/wincontrol.inc (revision 23296) [all …]`
/dports/editors/lazarus/examples/dockmanager/patches/
H A D	IdeFix_big.patch	`415 …ideintf/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../lcl/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../… 1108 // lcl 1606 Index: lcl/include/control.inc 1608 --- lcl/include/control.inc (revision 23296) 1609 +++ lcl/include/control.inc (working copy) 1686 Index: lcl/include/toolbutton.inc 1688 --- lcl/include/toolbutton.inc (revision 23296) 1689 +++ lcl/include/toolbutton.inc (working copy) 1698 Index: lcl/include/wincontrol.inc 1700 --- lcl/include/wincontrol.inc (revision 23296) [all …]`
/dports/editors/lazarus-qt5/examples/dockmanager/patches/
H A D	IdeFix_big.patch	`415 …ideintf/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../lcl/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../… 1108 // lcl 1606 Index: lcl/include/control.inc 1608 --- lcl/include/control.inc (revision 23296) 1609 +++ lcl/include/control.inc (working copy) 1686 Index: lcl/include/toolbutton.inc 1688 --- lcl/include/toolbutton.inc (revision 23296) 1689 +++ lcl/include/toolbutton.inc (working copy) 1698 Index: lcl/include/wincontrol.inc 1700 --- lcl/include/wincontrol.inc (revision 23296) [all …]`
/dports/editors/lazarus-qt5-devel/examples/dockmanager/patches/
H A D	IdeFix_big.patch	`415 …ideintf/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../lcl/units/$(CPU_TARGET)-$(OS_TARGET)/ ../../../… 1108 // lcl 1606 Index: lcl/include/control.inc 1608 --- lcl/include/control.inc (revision 23296) 1609 +++ lcl/include/control.inc (working copy) 1686 Index: lcl/include/toolbutton.inc 1688 --- lcl/include/toolbutton.inc (revision 23296) 1689 +++ lcl/include/toolbutton.inc (working copy) 1698 Index: lcl/include/wincontrol.inc 1700 --- lcl/include/wincontrol.inc (revision 23296) [all …]`
/dports/math/vtk9/VTK-9.1.0/ThirdParty/vtkm/vtkvtkm/vtk-m/vtkm/
H A D	CellShape.h	`21 namespace lcl 36 CELL_SHAPE_EMPTY = lcl::ShapeId::EMPTY, 37 CELL_SHAPE_VERTEX = lcl::ShapeId::VERTEX, 39 CELL_SHAPE_LINE = lcl::ShapeId::LINE, 41 CELL_SHAPE_TRIANGLE = lcl::ShapeId::TRIANGLE, 43 CELL_SHAPE_POLYGON = lcl::ShapeId::POLYGON, 45 CELL_SHAPE_QUAD = lcl::ShapeId::QUAD, 46 CELL_SHAPE_TETRA = lcl::ShapeId::TETRA, 49 CELL_SHAPE_WEDGE = lcl::ShapeId::WEDGE, 50 CELL_SHAPE_PYRAMID = lcl::ShapeId::PYRAMID, [all …]`
/dports/devel/splint/splint-3.1.2/test/
H A D	enum.expect	4 enum.lcl:2:16: Specification of cero: enum { cero, uno, dos } 7 enum.lcl:2:22: Specification of uno: enum { cero, uno, dos } 10 enum.lcl:2:27: Specification of dos: enum { cero, uno, dos } 13 enum.lcl:2:33: Specification of stype 16 enum.lcl:3:23: Specification of siete: enum _ietag { siete } 19 enum.lcl:6:41: Specification of st2 34 enum.lcl:3:9: Enum tag enum _ietag specified but not defined 35 enum.lcl:8:22: Enum member yasta specified but not defined 50 enum.lcl:2:33: Specification of stype 56 enum.lcl:6:41: Specification of st2 [all …]

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