Searched refs:lcopies (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/migrate/migrate-3.6.11/src/ |
| H A D | broyden.c | 642 tl->lcopies = ln_copies(copies); in calc_locus_like()
647 apg[0] = tl->lcopies + probG4 (locallparam, tl->data, stop) - apg0r[0] + normaldev; in calc_locus_like()
650 … apg[0] = tl->lcopies + probG4_longsum(locallparam,tl->longsum,tl->longsumlen, numpop,numpop2) in calc_locus_like()
665 tl->lcopies = ln_copies(tl->copies); in calc_locus_like()
670 apg[g] = tl->lcopies + probG4 (locallparam, tl->data, stop) - apg0r[g] in calc_locus_like()
674 … apg[g] = tl->lcopies + probG4_longsum(locallparam,tl->longsum,tl->longsumlen, numpop,numpop2) in calc_locus_like()
2099 atl->tl[0].lcopies = ln_copies (atl->tl[0].copies - 1); in copies2lcopies()
2101 atl->tl[0].lcopies = -MYREAL_MAX; in copies2lcopies()
2104 atl->tl[g].lcopies = ln_copies (atl->tl[g].copies); in copies2lcopies()
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| H A D | tools.c | 1426 … retval = fscanf (sumfile, "%li %f\n", &ta[r][l].tl[i].copies, &ta[r][l].tl[i].lcopies); in read_savesum()
1428 … retval = fscanf (sumfile, "%li %lf\n", &ta[r][l].tl[i].copies, &ta[r][l].tl[i].lcopies); in read_savesum()
1552 fprintf (sumfile, "%li %f\n", ta[r][l].tl[i].copies,ta[r][l].tl[i].lcopies); in write_savesum()
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| H A D | migration.h | 758 MYREAL lcopies; member
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| H A D | migrate_mpi.c | 3283 ta[replicate][locus].tl[i].lcopies = buffer[z++]; in unpack_single_sumfile_buffer()
3327 (*buffer)[z++] = ta[replicate][locus].tl[i].lcopies; in pack_single_sumfile_buffer()
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