Searched refs:lnga1 (Results 1 – 5 of 5) sorted by relevance
| /dports/biology/iqtree/IQ-TREE-2.0.6/model/ |
| H A D | rategamma.cpp | 161 double lnga1=cmpLnGamma(gamma_shape+1); in computeRatesMean() local
166 freqK[i]=cmpIncompleteGamma(freqK[i]*gamma_shape, gamma_shape+1, lnga1); in computeRatesMean()
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| /dports/biology/iqtree/IQ-TREE-2.0.6/pll/ |
| H A D | models.c | 3869 lnga1, in pllMakeGammaCats() local
3896 lnga1 = LnGamma(alfa + 1); in pllMakeGammaCats()
3902 gammaProbs[i] = IncompleteGamma(gammaProbs[i] * beta, alfa + 1, lnga1); in pllMakeGammaCats()
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| /dports/biology/phyml/phyml-3.3.20200621/src/ |
| H A D | stats.c | 1921 phydbl gap05=1.0/(2.0*K), t, factor=alfa/beta*K, lnga1; in DiscreteGamma() local
1938 lnga1=LnGamma(alfa+1); in DiscreteGamma()
1946 freqK[i]=IncompleteGamma(freqK[i]*beta, alfa+1, lnga1); in DiscreteGamma()
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| /dports/biology/paml/paml4.9j/src/ |
| H A D | tools.c | 2523 double t, mean = alpha / beta, lnga1; in DiscreteGamma() local
2531 lnga1 = LnGamma(alpha + 1); in DiscreteGamma()
2535 freqK[i] = IncompleteGamma(freqK[i] * beta, alpha + 1, lnga1); in DiscreteGamma()
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| /dports/biology/mrbayes/MrBayes-3.2.7/src/ |
| H A D | utils.c | 10432 MrBFlt gap05 = 1.0/(2.0*K), t, factor = alfa/beta*K, lnga1; in DiscreteGamma() local
10445 lnga1 = LnGamma(alfa+1); in DiscreteGamma()
10451 rK[i] = IncompleteGamma(rK[i] * beta, alfa + 1.0, lnga1); in DiscreteGamma()
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