Searched refs:local_aa1 (Results 1 – 4 of 4) sorted by relevance
| /dports/biology/fasta3/fasta-36.3.8/src/ |
| H A D | wm_align.c | 167 unsigned char *local_aa1; in nsw_malign() local
207 local_aa1 = (unsigned char *)calloc(cur_ares->min1+2,sizeof(unsigned char)); in nsw_malign()
208 local_aa1++; in nsw_malign()
209 memcpy(local_aa1,aa1,cur_ares->min1); in nsw_malign()
214 tmpl_ares = nsw_malign(pam2p, pam_ix, n0, local_aa1, cur_ares->min1, in nsw_malign()
218 free(--local_aa1); in nsw_malign()
240 local_aa1 = (unsigned char *)calloc(n1-cur_ares->max1+2,sizeof(unsigned char)); in nsw_malign()
241 local_aa1++; in nsw_malign()
242 memcpy(local_aa1,aa1+cur_ares->max1,n1-cur_ares->max1); in nsw_malign()
248 tmpr_ares = nsw_malign(pam2p, pam_ix, n0, local_aa1, n1 - cur_ares->max1, in nsw_malign()
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| H A D | dropnfa.c | 1330 unsigned char *local_aa1; in bd_malign() local
1384 local_aa1 = (unsigned char *)aa1; in bd_malign()
1395 local_aa1++; in bd_malign()
1396 memcpy(local_aa1,aa1+l_min, l_max - l_min); in bd_malign()
1416 if (have_local_aa1) {free(--local_aa1);} in bd_malign()
1441 local_aa1++; in bd_malign()
1442 memcpy(local_aa1,aa1,cur_ares->min1); in bd_malign()
1451 free(--local_aa1); in bd_malign()
1481 local_aa1++; in bd_malign()
1482 memcpy(local_aa1,aa1+cur_ares->max1, local_n1); in bd_malign()
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| H A D | dropfz3.c | 2286 unsigned char *local_aa1; local
2325 local_aa1 = (unsigned char *)aa1;
2328 local_aa1++;
2351 local_aa1++;
2378 local_aa1++;
2464 unsigned char *local_aa1; local
2519 local_aa1++;
2530 free(--local_aa1);
2573 local_aa1++;
2581 local_aa1, cur_ares->v_len,
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| H A D | dropfz2.c | 2286 unsigned char *local_aa1; local
2325 local_aa1 = (unsigned char *)aa1;
2328 local_aa1++;
2351 local_aa1++;
2378 local_aa1++;
2464 unsigned char *local_aa1; local
2519 local_aa1++;
2530 free(--local_aa1);
2573 local_aa1++;
2581 local_aa1, cur_ares->v_len,
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