| /dports/biology/fasta/fasta/ |
| H A D | prdf.c | 127 int nsav, lowscor; /* number of saved runs, worst saved variable
676 lowscor = 0;
702 if ((tscor += kfact)<0 && lowscor<scor)
705 && lowscor < scor)
742 if ((dptr= &diag[lpos%nd])->score>lowscor)
752 if ((dptr= &diag[dpos%nd])->score>lowscor) savemax(dptr,dpos);
756 if (dptr->score>lowscor) savemax(dptr);
838 lowscor = i;
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| H A D | fffasta.c | 331 int nsav, lowscor; /* number of saved runs, worst saved variable
1565 lowscor = 0;
1590 if ((tscor += kfact)<0 && lowscor<scor)
1593 && lowscor < scor)
1634 if ((dptr= &diag[lpos%nd])->score>lowscor)
1644 if ((dptr= &diag[dpos%nd])->score>lowscor) savemax(dptr,dpos);
1648 if (dptr->score>lowscor) savemax(dptr);
1914 lowscor = i;
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| H A D | prss.c | 87 int nsav, lowscor; /* number of saved runs, worst saved variable
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| H A D | ssearch.c | 175 int nsav, lowscor; /* number of saved runs, worst saved variable
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| /dports/biology/fasta3/fasta-36.3.8/src/ |
| H A D | tatstats.h | 84 int nsav, lowscor; /* number of saved runs, worst saved run */ member
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| H A D | dropfs2.c | 639 f_str->lowscor = 0; in do_fasts()
688 && f_str->lowscor < scor) { in do_fasts()
704 else if (dptr->score > f_str->lowscor) in do_fasts()
721 else if (dptr->score > f_str->lowscor) in do_fasts()
734 if (dptr->score > f_str->lowscor) savemax (dptr, f_str, maxsav,0,-1); in do_fasts()
1001 f_str->lowscor = i; in savemax()
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| H A D | dropfx2.c | 636 int lowscor; local
731 lowscor = 0;
774 if ((tscor += (kfact = f_str->pamh2[lhval])) < 0 && lowscor < scor) {
776 lowscor = savemax (dptr, dpos, vmax, &lowmax);
778 lowscor = savemax (dptr, dptr - f_str->diag, vmax, &lowmax);
804 if ((dptr = &f_str->diag[lpos % nd])->score > lowscor) {
805 lowscor = savemax (dptr, lpos, vmax, &lowmax);
815 if ((dptr = &f_str->diag[dpos % nd])->score > lowscor) {
816 lowscor = savemax (dptr, dpos, vmax, &lowmax);
821 if (dptr->score > lowscor) {
[all …]
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| H A D | dropff2.c | 448 f_str->lowscor = 0; in do_fastf()
470 f_str->lowscor < scor) /* if updating tscor makes run worse, */ in do_fastf()
496 if (dptr->score > f_str->lowscor) savemax (dptr, f_str); in do_fastf()
721 f_str->lowscor = i;
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| H A D | dropfz3.c | 140 int nsav, lowscor; /* number of saved runs, worst saved run */ member
799 int lowscor; local
887 lowscor = 0;
931 if ((tscor += (kfact = f_str->pamh2[lhval])) < 0 && lowscor < scor) {
933 lowscor = savemax (dptr, dpos, vmax, &lowmax);
935 lowscor = savemax (dptr, dptr- f_str->diag, vmax, &lowmax);
961 if ((dptr = &f_str->diag[lpos % nd])->score > lowscor)
962 lowscor = savemax (dptr, lpos, vmax, &lowmax);
971 if ((dptr = &f_str->diag[dpos % nd])->score > lowscor)
972 lowscor = savemax (dptr, dpos, vmax, &lowmax, f_str);
[all …]
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| H A D | dropfx.c | 634 int lowscor; local
729 lowscor = 0;
772 if ((tscor += (kfact = f_str->pamh2[lhval])) < 0 && lowscor < scor) {
774 lowscor = savemax (dptr, dpos, vmax, &lowmax);
776 lowscor = savemax (dptr, dptr - f_str->diag, vmax, &lowmax);
802 if ((dptr = &f_str->diag[lpos % nd])->score > lowscor) {
803 lowscor = savemax (dptr, lpos, vmax, &lowmax);
813 if ((dptr = &f_str->diag[dpos % nd])->score > lowscor) {
814 lowscor = savemax (dptr, dpos, vmax, &lowmax);
819 if (dptr->score > lowscor) {
[all …]
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| H A D | dropfz2.c | 140 int nsav, lowscor; /* number of saved runs, worst saved run */ member
799 int lowscor; local
887 lowscor = 0;
931 if ((tscor += (kfact = f_str->pamh2[lhval])) < 0 && lowscor < scor) {
933 lowscor = savemax (dptr, dpos, vmax, &lowmax);
935 lowscor = savemax (dptr, dptr- f_str->diag, vmax, &lowmax);
961 if ((dptr = &f_str->diag[lpos % nd])->score > lowscor)
962 lowscor = savemax (dptr, lpos, vmax, &lowmax);
971 if ((dptr = &f_str->diag[dpos % nd])->score > lowscor)
972 lowscor = savemax (dptr, dpos, vmax, &lowmax, f_str);
[all …]
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| H A D | dropnfa.c | 572 int lowscor; in do_fasta() local
661 lowscor = 0; in do_fasta()
707 if ((tscor += (kfact = f_str->pamh2[lhval])) < 0 && lowscor < scor) { in do_fasta()
708 lowscor = savemax(dptr, dptr - f_str->diag, vmax, &lowmax); in do_fasta()
739 if (dptr->score > lowscor) { in do_fasta()
740 lowscor = savemax (dptr, dptr-f_str->diag, vmax, &lowmax); in do_fasta()
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