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Searched refs:m_PssmInput (Results 1 – 4 of 4) sorted by relevance

/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/algo/blast/api/
H A Dpssm_engine.cpp287 if (m_PssmInput) { in Run()
378 _ASSERT(m_PssmInput); in x_CreatePssmFromMsa()
380 m_PssmInput->Process(); in x_CreatePssmFromMsa()
381 s_Validate(m_PssmInput); in x_CreatePssmFromMsa()
588 return (m_PssmInput ? in x_GetQuery()
595 return (m_PssmInput ? in x_GetQueryLength()
596 m_PssmInput->GetQueryLength() : in x_GetQueryLength()
603 return (m_PssmInput ? in x_GetMatrixName()
604 m_PssmInput->GetMatrixName() : in x_GetMatrixName()
611 return (m_PssmInput ? in x_GetGapExistence()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/algo/blast/api/
H A Dpssm_engine.cpp287 if (m_PssmInput) { in Run()
378 _ASSERT(m_PssmInput); in x_CreatePssmFromMsa()
380 m_PssmInput->Process(); in x_CreatePssmFromMsa()
381 s_Validate(m_PssmInput); in x_CreatePssmFromMsa()
588 return (m_PssmInput ? in x_GetQuery()
595 return (m_PssmInput ? in x_GetQueryLength()
596 m_PssmInput->GetQueryLength() : in x_GetQueryLength()
603 return (m_PssmInput ? in x_GetMatrixName()
604 m_PssmInput->GetMatrixName() : in x_GetMatrixName()
611 return (m_PssmInput ? in x_GetGapExistence()
[all …]
/dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/algo/blast/api/
H A Dpssm_engine.hpp137 IPssmInputData* m_PssmInput; member in CPssmEngine
/dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/algo/blast/api/
H A Dpssm_engine.hpp137 IPssmInputData* m_PssmInput; member in CPssmEngine