Searched refs:m_mdtag (Results 1 – 2 of 2) sorted by relevance
426 if( m_mdtag.length() == 0 ) return m_cigar; in GetFullCigar()429 m_mdptr = m_mdtag.c_str(); in GetFullCigar()446 …) THROW( runtime_error, "Unexpected end of CIGAR " << m_cigar.ToString() << ", MD:Z:" << m_mdtag ); in GetFullCigar()458 …ntime_error, "too short CIGAR " << m_cigar.ToString() << " for MD:Z:" << m_mdtag << " (" << m_mdpt… in GetFullCigar()473 …m_cigar.begin()) << ", cnt=" << m_ccount << ") MD:Z:" << m_mdtag << " (off=" << (m_mdptr-m_mdtag.c… in GetFullCigar()480 …hen parsing MD deletion for CIGAR " << m_cigar.ToString() << " MD:Z:" << m_mdtag << " (" << m_mdpt… in GetFullCigar()486 …pected MD item '" << *m_mdptr << "' for CIGAR " << m_cigar.ToString() << " and MD:Z:" << m_mdtag ); in GetFullCigar()
110 : m_cigar( cigar ), m_mdtag( mdtag ), m_current( cigar.begin() ) {} in CSamMdParser()127 const string& m_mdtag; member in CSamMdParser