Home
last modified time | relevance | path

Searched refs:mapRS2chr (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dgemma_io.h52 bool ReadFile_anno(const string &file_bim, map<string, string> &mapRS2chr,
66 const double &r2_level, map<string, string> &mapRS2chr,
H A Dparam.h314 map<string, string> mapRS2chr; // Map rs# to chromosome location. variable
H A Dparam.cpp296 if (ReadFile_anno(file_anno, mapRS2chr, mapRS2bp, mapRS2cM) == false) { in ReadFiles()
317 maf_level, miss_level, hwe_level, r2_level, mapRS2chr, in ReadFiles()
394 if (ReadFile_anno(file_anno, mapRS2chr, mapRS2bp, mapRS2cM) == false) { in ReadFiles()
423 maf_level, miss_level, hwe_level, r2_level, mapRS2chr, in ReadFiles()
498 LOCO_set_Snps(setKSnps, setGWASnps, mapRS2chr, loco); in ReadFiles()
H A Dgemma_io.cpp279 bool ReadFile_anno(const string &file_anno, map<string, string> &mapRS2chr, in ReadFile_anno() argument
283 mapRS2chr.clear(); in ReadFile_anno()
328 mapRS2chr[rs] = chr; in ReadFile_anno()
639 const double &r2_level, map<string, string> &mapRS2chr, in ReadFile_geno() argument
728 chr = mapRS2chr[rs]; in ReadFile_geno()