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Searched refs:max_filter_slen (Results 1 – 6 of 6) sorted by relevance

/dports/biology/plink/plink-ng-79b2df8c/2.0/
H A Dplink2_data.h95 …riant_ct, uint32_t max_allele_ct, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
97 …riant_ct, uint32_t max_allele_ct, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
H A Dplink2_export.h59 …ct, uint32_t max_variant_id_slen, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
H A Dplink2_pvar.cc1260 uint32_t max_filter_slen = 0; in LoadPvar() local
1592 if (filter_slen > max_filter_slen) { in LoadPvar()
1593 max_filter_slen = filter_slen; in LoadPvar()
1824 *max_filter_slen_ptr = max_filter_slen; in LoadPvar()
H A Dplink2_data.cc526 …_blen, InfoFlags info_flags, uint32_t nonref_flags_storage, uint32_t max_filter_slen, uint32_t inf…
544 …ze = kCompressStreamBlock + kMaxIdSlen + 512 + 2 * max_allele_slen + max_filter_slen + info_reload…
3570 …_blen, InfoFlags info_flags, uint32_t nonref_flags_storage, uint32_t max_filter_slen, uint32_t inf… in WritePvarSplit() argument
3616 …ze = kCompressStreamBlock + kMaxIdSlen + 512 + 2 * max_allele_slen + max_filter_slen + info_reload… in WritePvarSplit()
6633 …riant_ct, uint32_t max_allele_ct, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
6740 …ct, max_allele_slen, xheader_blen, info_flags, nonref_flags_storage, max_filter_slen, info_reload_…
6753 …_id_max_allele_slen, xheader_blen, info_flags, nonref_flags_storage, max_filter_slen, info_reload_…
7677 …_blen, InfoFlags info_flags, uint32_t nonref_flags_storage, uint32_t max_filter_slen, uint32_t inf…
7694 …ze = kCompressStreamBlock + kMaxIdSlen + 512 + 2 * max_allele_slen + max_filter_slen + info_reload…
7874 …riant_ct, uint32_t max_allele_ct, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
[all …]
H A Dplink2_export.cc4175 …_variant_ct, uint32_t variant_ct, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
4269 …_t writebuf_blen_lbound = sample_ct * output_bytes_per_sample + 32 + max_filter_slen + info_reload…
7395 …_variant_ct, uint32_t variant_ct, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
7887 …uint64_t writebuf_blen = max_chr_slen + S_CAST(uint64_t, kMaxIdSlen) + (max_filter_slen + info_rel…
9822 …ct, uint32_t max_variant_id_slen, uint32_t max_allele_slen, uint32_t max_filter_slen, uint32_t inf…
9964 … info_flags, sample_ct, raw_variant_ct, variant_ct, max_allele_slen, max_filter_slen, info_reload_…
9970 … info_flags, sample_ct, raw_variant_ct, variant_ct, max_allele_slen, max_filter_slen, info_reload_…
H A Dplink2.cc848 uint32_t max_filter_slen = 0; in Plink2Core() local
861 …t_ct, &variant_ct, &max_allele_ct, &max_allele_slen, &xheader_blen, &info_flags, &max_filter_slen); in Plink2Core()
2526 …me_blen, raw_variant_ct, variant_ct, max_allele_ct, max_allele_slen, max_filter_slen, info_reload_… in Plink2Core()
2531 …me_blen, raw_variant_ct, variant_ct, max_allele_ct, max_allele_slen, max_filter_slen, info_reload_… in Plink2Core()
2541 …n, raw_variant_ct, variant_ct, max_variant_id_slen, max_allele_slen, max_filter_slen, info_reload_… in Plink2Core()