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/dports/biology/bolt-lmm/BOLT-LMM_v2.3.4/src/
H A DSnpData.cpp112 for (uint64 mchr0 = 0; mchr0 < Mchr; mchr0 += mBlock) { // sgemm to compute r2s in estChipLDscoresChrom() local
113 uint64 mBlockCrop = std::min(Mchr, mchr0+mBlock) - mchr0; in estChipLDscoresChrom()
114 while (!isProximal(chrStart + mchrWindowStart, chrStart + mchr0, 0.01, 1000000)) in estChipLDscoresChrom()
116 uint64 prevWindowSize = mchr0+mBlockCrop-1 - mchrWindowStart; in estChipLDscoresChrom()
128 float *B_ = chrNormalizedGenos + mchr0*Nsub; in estChipLDscoresChrom()
138 uint64 m = chrStart + mchr0 + mPlus; in estChipLDscoresChrom()
140 for (uint64 mPlus2 = 0; mchrWindowStart+mPlus2 < mchr0+mPlus; mPlus2++) { in estChipLDscoresChrom()