Searched refs:mean_rsq_sub (Results 1 – 3 of 3) sorted by relevance
/dports/biology/gcta/gcta_1.26.0_src/ |
H A D | ld.cpp | 408 mean_rsq_sub[j] = 0.0; in calcu_ld_blk() 419 else mean_rsq_sub[j] += rsq_sub(j,k); in calcu_ld_blk() 424 if (rsq_size[j] > 0.0) mean_rsq_sub[j] /= rsq_size[j]; in calcu_ld_blk() 437 mean_rsq[k] = mean_rsq_sub[j]; in calcu_ld_blk() 493 mean_rsq_sub[k] = mean_rsq_sub_sub[j]; in calcu_ld_blk_split() 637 eigenVector mean_rsq_sub = eigenVector::Zero(size); in calcu_ld_blk_multiSet() local 647 mean_rsq_sub[j] = 0.0; in calcu_ld_blk_multiSet() 659 else mean_rsq_sub[j] += rsq_sub(j,k); in calcu_ld_blk_multiSet() 664 if (rsq_size[j] > 0.0) mean_rsq_sub[j] /= rsq_size[j]; in calcu_ld_blk_multiSet() 676 (mean_rsq[s])[k] = mean_rsq_sub[j]; in calcu_ld_blk_multiSet() [all …]
|
H A D | mkl.cpp | 630 vector<double> rsq_size(size), mean_rsq_sub(size), max_rsq_sub(size); in calcu_ld_blk_mkl() local 633 …blk_split_mkl(size, size_limit, X_sub, ssx_sub, rsq_cutoff, rsq_size, mean_rsq_sub, max_rsq_sub, s… in calcu_ld_blk_mkl() 640 mean_rsq_sub[j] = 0.0; in calcu_ld_blk_mkl() 652 mean_rsq_sub[j] += rsq_sub[l]; in calcu_ld_blk_mkl() 657 if (rsq_size[j] > 0.0) mean_rsq_sub[j] /= rsq_size[j]; in calcu_ld_blk_mkl() 666 …mean_rsq[k] = (mean_rsq[k] * snp_num[k] + mean_rsq_sub[j] * rsq_size[j]) / (snp_num[k] + rsq_size[… in calcu_ld_blk_mkl() 672 mean_rsq[k] = mean_rsq_sub[j]; in calcu_ld_blk_mkl() 680 …ssx_sub, double rsq_cutoff, vector<double> &rsq_size, vector<double> &mean_rsq_sub, vector<double>… in calcu_ld_blk_split_mkl() argument 740 mean_rsq_sub[k] = mean_rsq_sub_sub[j]; in calcu_ld_blk_split_mkl()
|
H A D | gcta.h | 293 …sx_sqrt_i_sub, double rsq_cutoff, eigenVector &rsq_size, eigenVector &mean_rsq_sub, eigenVector &m… 298 …sx_sqrt_i_sub, double rsq_cutoff, eigenVector &rsq_size, eigenVector &mean_rsq_sub, eigenVector &m… 339 …ssx_sub, double rsq_cutoff, vector<double> &rsq_size, vector<double> &mean_rsq_sub, vector<double>…
|