Searched refs:min_km_count (Results 1 – 1 of 1) sorted by relevance
65 size_t min_km_count = 2; variable1617 graph.rebuild(seqs_to_assemble[both], min_km_count); in assemble_locus_contig()1761 graph.rebuild(*todo_seqs, min_km_count); in assemble_locus_contig()2990 min_km_count = atoi(optarg); in parse_command_line()3159 if (min_km_count != 2 || max_debruijn_reads != 1000) { in parse_command_line()3266 if (min_km_count != 2) in parse_command_line()3267 os << " Minimum kmer count: " << min_km_count << "\n"; in parse_command_line()