Searched refs:minimizeMultiDimen (Results 1 – 13 of 13) sorted by relevance
| /dports/biology/iqtree/IQ-TREE-2.0.6/utils/ |
| H A D | optimization.h | 176 double minimizeMultiDimen(double guess[], int ndim, double lower[], double upper[],
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| H A D | optimization.cpp | 717 double Optimization::minimizeMultiDimen(double guess[], int ndim, double lower[], double upper[], b… in minimizeMultiDimen() function in Optimization
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| /dports/biology/iqtree/IQ-TREE-2.0.6/model/ |
| H A D | ratekategory.cpp | 84 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeParameters()
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| H A D | rategammainvar.cpp | 166 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeParameters()
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| H A D | ratefree.cpp | 281 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeParameters()
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| H A D | partitionmodel.cpp | 351 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeLinkedModel()
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| H A D | modelgtr.cpp | 581 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeParameters()
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| H A D | modelcodon.cpp | 1020 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeParameters()
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| H A D | modelfactory.cpp | 1023 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeAllParameters()
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| H A D | modelmarkov.cpp | 991 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(gradient_e… in optimizeParameters()
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| /dports/biology/iqtree/IQ-TREE-2.0.6/tree/ |
| H A D | phylotreemixlen.cpp | 415 …score = -minimizeMultiDimen(variables, mixlen, lower_bound, upper_bound, bound_check, params->min_… in optimizeOneBranch()
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| /dports/biology/iqtree/IQ-TREE-2.0.6/obsolete/ |
| H A D | ngs.cpp | 375 …score = -minimizeMultiDimen(variables, ndim, lower_bound, upper_bound, bound_check, max(epsilon, 1… in optimizeParameters()
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| /dports/biology/iqtree/IQ-TREE-2.0.6/main/ |
| H A D | treetesting.cpp | 584 minimizeMultiDimen(x, 2, lower, upper, bound_check, 1e-4); in optimizeDC()
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