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Searched refs:mphen2 (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gcta/gcta_1.26.0_src/
H A Dbivar_reml.cpp15 …keep_indi_file, string remove_indi_file, string sex_file, int mphen, int mphen2, double grm_cutoff… in fit_bivar_reml() argument
46 read_phen(phen_file, phen_ID, phen_buf, mphen, mphen2); in fit_bivar_reml()
81 mphen2--; in fit_bivar_reml()
86 if (phen_buf[i][mphen2] != "NA" && phen_buf[i][mphen2] != "-9") n2++; in fit_bivar_reml()
88 ystr2[iter->second] = phen_buf[i][mphen2]; in fit_bivar_reml()
H A Doption.cpp97 int mphen = 1, mphen2 = 2, reml_mtd = 0, MaxIter = 100; in option() local
688 mphen2 = 2; in option()
691 mphen2 = mphen_buf[1]; in option()
693 …if (mphen < 1 || mphen2 < 1 || mphen == mphen2) throw ("\nError: --reml-bivar. Invalid input param… in option()
694 cout << "--reml-bivar " << mphen << " " << mphen2 << endl; in option()
1118 …ar_file, covar_file, kp_indi_file, rm_indi_file, update_sex_file, mphen, mphen2, grm_cutoff, grm_a… in option()
H A Dest_hsq.cpp40 …ng phen_file, vector<string> &phen_ID, vector< vector<string> > &phen_buf, int mphen, int mphen2) { in read_phen() argument
60 if (_bivar_reml && mphen2 > phen_num) { in read_phen()
62 … errmsg << "Error: can not find the " << mphen2 << "th trait in the file [" + phen_file + "]."; in read_phen()
65 …if (_bivar_reml) cout << "Traits " << mphen << " and " << mphen2 << " are included in the bivariat… in read_phen()
71 mphen2--; in read_phen()
85 …(vs_buf[mphen] == "-9" || vs_buf[mphen] == "NA") && (vs_buf[mphen2] == "-9" || vs_buf[mphen2] == "… in read_phen()
H A Dgcta.h120 …keep_indi_file, string remove_indi_file, string sex_file, int mphen, int mphen2, double grm_cutoff…
233 …phen_file, vector<string> &phen_ID, vector< vector<string> > &phen_buf, int mphen, int mphen2 = 0);