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Searched refs:n_link (Results 1 – 25 of 31) sorted by relevance

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/dports/biology/phyml/phyml-3.3.20200621/src/
H A Dspr.c382 if(n_link->v[dir1]->num < n_link->v[dir2]->num) in Test_All_Spr_Targets()
642 if(n_link->v[dir_v1]->num > n_link->v[dir_v2]->num) in Test_One_Spr_Target()
690 move->n_link = n_link; in Test_One_Spr_Target()
699 Prune_Subtree(n_link, in Test_One_Spr_Target()
1264 if(move->n_link->v[dir_v1]->num > move->n_link->v[dir_v2]->num) in Evaluate_List_Of_Regraft_Pos_Triple()
1336 for(j=0;j<3;++j) Update_Partial_Lk(tree,move->n_link->b[j],move->n_link); in Evaluate_List_Of_Regraft_Pos_Triple()
1344 Pre_Order_Lk(move->n_link,move->n_link->v[j],tree); in Evaluate_List_Of_Regraft_Pos_Triple()
1395 Prune_Subtree(move->n_link, in Try_One_Spr_Move_Triple()
1417 if(move->n_link->v[dir_v1]->num > move->n_link->v[dir_v2]->num) in Try_One_Spr_Move_Triple()
1525 Prune_Subtree(move->n_link, in Try_One_Spr_Move_Full()
[all …]
H A Dspr.h59 t_spr *Test_One_Spr_Target(t_edge *b_target, t_edge *b_arrow, t_node *n_link, t_edge *b_residual, t…
/dports/biology/canu/canu-2.2/src/correction/
H A DfalconConsensus-msa.H79 n_link = 0; in clean()
89 if (n_link >= size) { in addEntry()
92 ns = size; resizeArray(p_t_pos, n_link, ns, size + 16); in addEntry()
93 ns = size; resizeArray(p_delta, n_link, ns, size + 16); in addEntry()
94 ns = size; resizeArray(p_q_base, n_link, ns, size + 16); in addEntry()
95 ns = size; resizeArray(link_count, n_link, ns, size + 16); in addEntry()
100 p_t_pos [n_link] = tag->p_t_pos; in addEntry()
101 p_delta [n_link] = tag->p_delta; in addEntry()
102 p_q_base [n_link] = tag->p_q_base; in addEntry()
103 link_count[n_link] = 1; in addEntry()
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H A DfalconConsensus.C132 for (int32 kk=0; kk<col.n_link; kk++) { in getConsensus()
187 for (uint32 ck=0; ck<aln_col->n_link; ck++) { in getConsensus()
/dports/science/py-pymol/pymol-open-source-2.4.0/layer0/
H A DTracker.cpp69 int n_link; member
128 I->n_link++; in GetNewMember()
142 I->n_link--; in ReleaseMember()
554 return I->n_link; in TrackerGetNLink()
1026 int n_link = 0; in TrackerUnitTest() local
1035 n_link++; in TrackerUnitTest()
1048 n_link--; in TrackerUnitTest()
1059 n_link--; in TrackerUnitTest()
1082 n_link++; in TrackerUnitTest()
1247 n_link++; in TrackerUnitTest()
[all …]
H A DTetsurf.cpp767 int n_link = 1; in TetsurfFindActiveBoxes() local
1080 I->PtLink[n_link].tri = n_tri; in TetsurfFindActiveBoxes()
1081 I->PtLink[n_link].link = tt->p[0]->Link; in TetsurfFindActiveBoxes()
1082 tt->p[0]->Link = n_link; in TetsurfFindActiveBoxes()
1083 n_link++; in TetsurfFindActiveBoxes()
1085 I->PtLink[n_link].tri = n_tri; in TetsurfFindActiveBoxes()
1087 tt->p[1]->Link = n_link; in TetsurfFindActiveBoxes()
1088 n_link++; in TetsurfFindActiveBoxes()
1090 I->PtLink[n_link].tri = n_tri; in TetsurfFindActiveBoxes()
1092 tt->p[2]->Link = n_link; in TetsurfFindActiveBoxes()
[all …]
/dports/mail/pathalias/pathalias-9.16/
H A Daddlink.c35 for (l = from->n_link; l; l = l->l_next) {
58 l->l_next = from->n_link;
59 from->n_link = l;
96 while ((l = nleft->n_link) != 0 && l->l_to == nright) {
97 nleft->n_link = l->l_next; /* disconnect */
103 for (lprev = nleft->n_link; lprev && lprev->l_next; lprev = lprev->l_next) {
248 l = from->n_link;
258 from->n_link = 0;
267 l = from->n_link = lnext;
H A Dmapaux.c81 if (n->n_link == 0) in dumpgraph()
97 for (l = from->n_link ; l; l = l->l_next) {
178 for (l = n->n_link; l; l = l->l_next) {
204 if (n == 0 || n->n_link == 0) in showlinks()
206 for (l = n->n_link; l; l = l->l_next) { in showlinks()
335 ncp->n_link = lcopy(parent, n);
356 for (l = n->n_link; l != 0; l = l->l_next) {
H A Dprintit.c43 for (l = Home->n_link; l; l = l->l_next) { in printit()
91 for (l = n->n_link; l; l = l->l_next) {
134 for (l = n->n_link; l; l = l->l_next) {
143 for (l = ncp->n_link; l; l = l->l_next) {
H A Ddef.h66 palink *n_link; /* adjacency list */ member
136 palink *n_link; member
H A Dmapit.c119 for (l = n->n_link; l; l = l->l_next) {
510 for (l = nomap->n_link; l; l = l->l_next) { in backlinks()
643 if ((l = Heap[i]->l_to->n_link) != 0) do {
653 if ((l = Table[i]->n_link) != 0) do {
/dports/graphics/pcl-pointclouds/pcl-pcl-1.12.0/segmentation/include/pcl/segmentation/impl/
H A Dgrabcut_segmentation.hpp317 const NLinks &n_link = n_links_[i_point]; in initGraph() local
318 if (n_link.nb_links > 0) in initGraph()
321 std::vector<float>::const_iterator weights_it = n_link.weights.begin (); in initGraph()
322 …for (auto indices_it = n_link.indices.cbegin (); indices_it != n_link.indices.cend (); ++indices_i… in initGraph()
339 NLinks &n_link = n_links_[i_point]; in computeNLinksNonOrganized() local
340 if (n_link.nb_links > 0) in computeNLinksNonOrganized()
343 auto dists_it = n_link.dists.cbegin (); in computeNLinksNonOrganized()
344 auto weights_it = n_link.weights.begin (); in computeNLinksNonOrganized()
345 …for (auto indices_it = n_link.indices.cbegin (); indices_it != n_link.indices.cend (); ++indices_i… in computeNLinksNonOrganized()
/dports/databases/vfront/vfront-0.96c/
H A Drpc.allegati_link.php58 list($n_link)=$vmreg->fetch_row($q);
60 return (int) $n_link;
/dports/audio/sphinx3/sphinx3-0.8/src/libs3decoder/libsearch/
H A Dword_graph.c151 wgl->linkidx = wg->n_link; in new_word_graph_link()
154 wg->n_link++; in new_word_graph_link()
168 return wg->n_link - 1; in new_word_graph_link()
208 fprintf(fp, "Number of link %d\n", wg->n_link); in print_wg()
446 wg->n_link = 0; in dag_to_wordgraph()
H A Dsrch_allphone.c193 int32 i, n_link;
204 n_link = 0;
225 n_link++;
234 return n_link;
244 int32 n_phmm, n_link;
327 n_link = phmm_link(allp);
329 E_INFO("%d nodes, %d links\n", n_phmm, n_link);
/dports/www/p5-Template-Toolkit/Template-Toolkit-3.010/bin/
H A Dttree79 my ($n_proc, $n_unmod, $n_skip, $n_copy, $n_link, $n_mkdir) = (0) x 6;
247 green(sprintf($format, $n_link, $n_link == 1 ? 'file' : 'files', 'linked')),
445 $n_link++;
/dports/www/firefox-legacy/firefox-52.8.0esr/media/pocketsphinx/src/
H A Dallphone_search.c170 int32 i, n_link; in phmm_link() local
181 n_link = 0; in phmm_link()
202 n_link++; in phmm_link()
211 return n_link; in phmm_link()
227 int n_phmm, n_link; in phmm_build() local
310 n_link = phmm_link(allphs); in phmm_build()
312 E_INFO("%d nodes, %d links\n", n_phmm, n_link); in phmm_build()
/dports/audio/sphinx3/sphinx3-0.8/include/
H A Dword_graph.h132 int32 n_link; /**< Number of node */ member
/dports/net-p2p/libtorrent-rasterbar/libtorrent-rasterbar-1.2.14/src/
H A Dpath.cpp334 native_path_string n_link = convert_to_native_path_string(link); in hard_link() local
337 BOOL ret = CreateHardLinkW(n_link.c_str(), n_exist.c_str(), nullptr); in hard_link()
356 int ret = ::link(n_exist.c_str(), n_link.c_str()); in hard_link()
/dports/net-p2p/py-libtorrent-rasterbar/libtorrent-1.2.13/src/
H A Dpath.cpp334 native_path_string n_link = convert_to_native_path_string(link); in hard_link() local
337 BOOL ret = CreateHardLinkW(n_link.c_str(), n_exist.c_str(), nullptr); in hard_link()
356 int ret = ::link(n_exist.c_str(), n_link.c_str()); in hard_link()
/dports/devel/sccache/sccache-0.2.15/cargo-crates/pulldown-cmark-0.0.3/src/
H A Dscanners.rs467 let (n_link, link) = if n_uri != 0 { in scan_autolink()
474 i += n_link; in scan_autolink()
H A Dparse.rs727 let (n_link, text_beg, text_end, max_nest) = self.scan_link_label(data); in try_link_reference_definition()
728 if n_link == 0 || max_nest > 1 { return false; } in try_link_reference_definition()
729 let n_colon = scan_ch(&data[n_link ..], b':'); in try_link_reference_definition()
731 let mut i = n_link + n_colon; in try_link_reference_definition()
/dports/sysutils/potnet/potnet-0.4.4/cargo-crates/pulldown-cmark-0.2.0/src/
H A Dscanners.rs543 let (n_link, link) = if n_uri != 0 { in scan_autolink()
550 i += n_link; in scan_autolink()
H A Dparse.rs842 let (n_link, text_beg, text_end, max_nest) = self.scan_link_label(data); in try_link_reference_definition()
843 if n_link == 0 || max_nest > 1 { return false; } in try_link_reference_definition()
844 let n_colon = scan_ch(&data[n_link ..], b':'); in try_link_reference_definition()
846 let mut i = n_link + n_colon; in try_link_reference_definition()
/dports/textproc/angle-grinder/angle-grinder-0.18.0/cargo-crates/pulldown-cmark-0.2.0/src/
H A Dscanners.rs543 let (n_link, link) = if n_uri != 0 { in scan_autolink()
550 i += n_link; in scan_autolink()

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