/dports/biology/phyml/phyml-3.3.20200621/src/ |
H A D | spr.c | 382 if(n_link->v[dir1]->num < n_link->v[dir2]->num) in Test_All_Spr_Targets() 642 if(n_link->v[dir_v1]->num > n_link->v[dir_v2]->num) in Test_One_Spr_Target() 690 move->n_link = n_link; in Test_One_Spr_Target() 699 Prune_Subtree(n_link, in Test_One_Spr_Target() 1264 if(move->n_link->v[dir_v1]->num > move->n_link->v[dir_v2]->num) in Evaluate_List_Of_Regraft_Pos_Triple() 1336 for(j=0;j<3;++j) Update_Partial_Lk(tree,move->n_link->b[j],move->n_link); in Evaluate_List_Of_Regraft_Pos_Triple() 1344 Pre_Order_Lk(move->n_link,move->n_link->v[j],tree); in Evaluate_List_Of_Regraft_Pos_Triple() 1395 Prune_Subtree(move->n_link, in Try_One_Spr_Move_Triple() 1417 if(move->n_link->v[dir_v1]->num > move->n_link->v[dir_v2]->num) in Try_One_Spr_Move_Triple() 1525 Prune_Subtree(move->n_link, in Try_One_Spr_Move_Full() [all …]
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H A D | spr.h | 59 t_spr *Test_One_Spr_Target(t_edge *b_target, t_edge *b_arrow, t_node *n_link, t_edge *b_residual, t…
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/dports/biology/canu/canu-2.2/src/correction/ |
H A D | falconConsensus-msa.H | 79 n_link = 0; in clean() 89 if (n_link >= size) { in addEntry() 92 ns = size; resizeArray(p_t_pos, n_link, ns, size + 16); in addEntry() 93 ns = size; resizeArray(p_delta, n_link, ns, size + 16); in addEntry() 94 ns = size; resizeArray(p_q_base, n_link, ns, size + 16); in addEntry() 95 ns = size; resizeArray(link_count, n_link, ns, size + 16); in addEntry() 100 p_t_pos [n_link] = tag->p_t_pos; in addEntry() 101 p_delta [n_link] = tag->p_delta; in addEntry() 102 p_q_base [n_link] = tag->p_q_base; in addEntry() 103 link_count[n_link] = 1; in addEntry() [all …]
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H A D | falconConsensus.C | 132 for (int32 kk=0; kk<col.n_link; kk++) { in getConsensus() 187 for (uint32 ck=0; ck<aln_col->n_link; ck++) { in getConsensus()
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/dports/science/py-pymol/pymol-open-source-2.4.0/layer0/ |
H A D | Tracker.cpp | 69 int n_link; member 128 I->n_link++; in GetNewMember() 142 I->n_link--; in ReleaseMember() 554 return I->n_link; in TrackerGetNLink() 1026 int n_link = 0; in TrackerUnitTest() local 1035 n_link++; in TrackerUnitTest() 1048 n_link--; in TrackerUnitTest() 1059 n_link--; in TrackerUnitTest() 1082 n_link++; in TrackerUnitTest() 1247 n_link++; in TrackerUnitTest() [all …]
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H A D | Tetsurf.cpp | 767 int n_link = 1; in TetsurfFindActiveBoxes() local 1080 I->PtLink[n_link].tri = n_tri; in TetsurfFindActiveBoxes() 1081 I->PtLink[n_link].link = tt->p[0]->Link; in TetsurfFindActiveBoxes() 1082 tt->p[0]->Link = n_link; in TetsurfFindActiveBoxes() 1083 n_link++; in TetsurfFindActiveBoxes() 1085 I->PtLink[n_link].tri = n_tri; in TetsurfFindActiveBoxes() 1087 tt->p[1]->Link = n_link; in TetsurfFindActiveBoxes() 1088 n_link++; in TetsurfFindActiveBoxes() 1090 I->PtLink[n_link].tri = n_tri; in TetsurfFindActiveBoxes() 1092 tt->p[2]->Link = n_link; in TetsurfFindActiveBoxes() [all …]
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/dports/mail/pathalias/pathalias-9.16/ |
H A D | addlink.c | 35 for (l = from->n_link; l; l = l->l_next) { 58 l->l_next = from->n_link; 59 from->n_link = l; 96 while ((l = nleft->n_link) != 0 && l->l_to == nright) { 97 nleft->n_link = l->l_next; /* disconnect */ 103 for (lprev = nleft->n_link; lprev && lprev->l_next; lprev = lprev->l_next) { 248 l = from->n_link; 258 from->n_link = 0; 267 l = from->n_link = lnext;
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H A D | mapaux.c | 81 if (n->n_link == 0) in dumpgraph() 97 for (l = from->n_link ; l; l = l->l_next) { 178 for (l = n->n_link; l; l = l->l_next) { 204 if (n == 0 || n->n_link == 0) in showlinks() 206 for (l = n->n_link; l; l = l->l_next) { in showlinks() 335 ncp->n_link = lcopy(parent, n); 356 for (l = n->n_link; l != 0; l = l->l_next) {
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H A D | printit.c | 43 for (l = Home->n_link; l; l = l->l_next) { in printit() 91 for (l = n->n_link; l; l = l->l_next) { 134 for (l = n->n_link; l; l = l->l_next) { 143 for (l = ncp->n_link; l; l = l->l_next) {
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H A D | def.h | 66 palink *n_link; /* adjacency list */ member 136 palink *n_link; member
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H A D | mapit.c | 119 for (l = n->n_link; l; l = l->l_next) { 510 for (l = nomap->n_link; l; l = l->l_next) { in backlinks() 643 if ((l = Heap[i]->l_to->n_link) != 0) do { 653 if ((l = Table[i]->n_link) != 0) do {
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/dports/graphics/pcl-pointclouds/pcl-pcl-1.12.0/segmentation/include/pcl/segmentation/impl/ |
H A D | grabcut_segmentation.hpp | 317 const NLinks &n_link = n_links_[i_point]; in initGraph() local 318 if (n_link.nb_links > 0) in initGraph() 321 std::vector<float>::const_iterator weights_it = n_link.weights.begin (); in initGraph() 322 …for (auto indices_it = n_link.indices.cbegin (); indices_it != n_link.indices.cend (); ++indices_i… in initGraph() 339 NLinks &n_link = n_links_[i_point]; in computeNLinksNonOrganized() local 340 if (n_link.nb_links > 0) in computeNLinksNonOrganized() 343 auto dists_it = n_link.dists.cbegin (); in computeNLinksNonOrganized() 344 auto weights_it = n_link.weights.begin (); in computeNLinksNonOrganized() 345 …for (auto indices_it = n_link.indices.cbegin (); indices_it != n_link.indices.cend (); ++indices_i… in computeNLinksNonOrganized()
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/dports/databases/vfront/vfront-0.96c/ |
H A D | rpc.allegati_link.php | 58 list($n_link)=$vmreg->fetch_row($q); 60 return (int) $n_link;
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/dports/audio/sphinx3/sphinx3-0.8/src/libs3decoder/libsearch/ |
H A D | word_graph.c | 151 wgl->linkidx = wg->n_link; in new_word_graph_link() 154 wg->n_link++; in new_word_graph_link() 168 return wg->n_link - 1; in new_word_graph_link() 208 fprintf(fp, "Number of link %d\n", wg->n_link); in print_wg() 446 wg->n_link = 0; in dag_to_wordgraph()
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H A D | srch_allphone.c | 193 int32 i, n_link; 204 n_link = 0; 225 n_link++; 234 return n_link; 244 int32 n_phmm, n_link; 327 n_link = phmm_link(allp); 329 E_INFO("%d nodes, %d links\n", n_phmm, n_link);
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/dports/www/p5-Template-Toolkit/Template-Toolkit-3.010/bin/ |
H A D | ttree | 79 my ($n_proc, $n_unmod, $n_skip, $n_copy, $n_link, $n_mkdir) = (0) x 6; 247 green(sprintf($format, $n_link, $n_link == 1 ? 'file' : 'files', 'linked')), 445 $n_link++;
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/dports/www/firefox-legacy/firefox-52.8.0esr/media/pocketsphinx/src/ |
H A D | allphone_search.c | 170 int32 i, n_link; in phmm_link() local 181 n_link = 0; in phmm_link() 202 n_link++; in phmm_link() 211 return n_link; in phmm_link() 227 int n_phmm, n_link; in phmm_build() local 310 n_link = phmm_link(allphs); in phmm_build() 312 E_INFO("%d nodes, %d links\n", n_phmm, n_link); in phmm_build()
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/dports/audio/sphinx3/sphinx3-0.8/include/ |
H A D | word_graph.h | 132 int32 n_link; /**< Number of node */ member
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/dports/net-p2p/libtorrent-rasterbar/libtorrent-rasterbar-1.2.14/src/ |
H A D | path.cpp | 334 native_path_string n_link = convert_to_native_path_string(link); in hard_link() local 337 BOOL ret = CreateHardLinkW(n_link.c_str(), n_exist.c_str(), nullptr); in hard_link() 356 int ret = ::link(n_exist.c_str(), n_link.c_str()); in hard_link()
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/dports/net-p2p/py-libtorrent-rasterbar/libtorrent-1.2.13/src/ |
H A D | path.cpp | 334 native_path_string n_link = convert_to_native_path_string(link); in hard_link() local 337 BOOL ret = CreateHardLinkW(n_link.c_str(), n_exist.c_str(), nullptr); in hard_link() 356 int ret = ::link(n_exist.c_str(), n_link.c_str()); in hard_link()
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/dports/devel/sccache/sccache-0.2.15/cargo-crates/pulldown-cmark-0.0.3/src/ |
H A D | scanners.rs | 467 let (n_link, link) = if n_uri != 0 { in scan_autolink() 474 i += n_link; in scan_autolink()
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H A D | parse.rs | 727 let (n_link, text_beg, text_end, max_nest) = self.scan_link_label(data); in try_link_reference_definition() 728 if n_link == 0 || max_nest > 1 { return false; } in try_link_reference_definition() 729 let n_colon = scan_ch(&data[n_link ..], b':'); in try_link_reference_definition() 731 let mut i = n_link + n_colon; in try_link_reference_definition()
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/dports/sysutils/potnet/potnet-0.4.4/cargo-crates/pulldown-cmark-0.2.0/src/ |
H A D | scanners.rs | 543 let (n_link, link) = if n_uri != 0 { in scan_autolink() 550 i += n_link; in scan_autolink()
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H A D | parse.rs | 842 let (n_link, text_beg, text_end, max_nest) = self.scan_link_label(data); in try_link_reference_definition() 843 if n_link == 0 || max_nest > 1 { return false; } in try_link_reference_definition() 844 let n_colon = scan_ch(&data[n_link ..], b':'); in try_link_reference_definition() 846 let mut i = n_link + n_colon; in try_link_reference_definition()
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/dports/textproc/angle-grinder/angle-grinder-0.18.0/cargo-crates/pulldown-cmark-0.2.0/src/ |
H A D | scanners.rs | 543 let (n_link, link) = if n_uri != 0 { in scan_autolink() 550 i += n_link; in scan_autolink()
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