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Searched refs:n_mixt_classes (Results 1 – 5 of 5) sorted by relevance

/dports/biology/phyml/phyml-3.3.20200621/src/
H A Dmake.c29 …t = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeof(phydbl… in Make_Tree_For_Lk()
30 …ite_lk_cat = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->n_patte… in Make_Tree_For_Lk()
44 …tree->expl = _aligned_malloc(3*MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->mod->ns… in Make_Tree_For_Lk()
47 …tree->eigen_lr_left = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree… in Make_Tree_For_Lk()
48 …tree->eigen_lr_rght = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree… in Make_Tree_For_Lk()
50 …tree->expl = (phydbl *)mCalloc(3*MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->mod->… in Make_Tree_For_Lk()
270 …b->sum_scale_left_cat = (int *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeo… in Make_Edge_Lk_Left()
273 …)mCalloc(tree->data->crunch_len*MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeof(int)); in Make_Edge_Lk_Left()
340 …b->sum_scale_rght_cat = (int *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeo… in Make_Edge_Lk_Rght()
411 …tree->sum_scale_cat_extra_0 = (int *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)… in Make_Extra_Edge_Lk()
[all …]
H A Dmixt.c799 … = (phydbl *)mCalloc(MAX(mixt_tree->mod->ras->n_catg,mixt_tree->mod->n_mixt_classes),sizeof(phydbl… in MIXT_Lk()
800 … = (phydbl *)mCalloc(MAX(mixt_tree->mod->ras->n_catg,mixt_tree->mod->n_mixt_classes),sizeof(phydbl… in MIXT_Lk()
2536 …t = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeof(phydbl… in MIXT_Make_Tree_For_Lk()
2537 …ite_lk_cat = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->n_patte… in MIXT_Make_Tree_For_Lk()
2543 …if(posix_memalign((void **)&tree->expl,BYTE_ALIGN,(size_t)2*tree->mod->n_mixt_classes*tree->mod->n… in MIXT_Make_Tree_For_Lk()
2545 … tree->expl = _aligned_malloc(2*tree->mod->n_mixt_classes*tree->mod->ns*sizeof(phydbl),BYTE_ALIGN); in MIXT_Make_Tree_For_Lk()
2548 tree->expl = (phydbl *)mCalloc(2*tree->mod->n_mixt_classes*tree->mod->ns,sizeof(phydbl)); in MIXT_Make_Tree_For_Lk()
H A Dutilities.h1146 int n_mixt_classes; /* Number of classes in the mixture model. */ member
H A Dxml.c568 iomod->n_mixt_classes++; in XML_Process_Base()
H A Dinit.c643 mod->n_mixt_classes = 0; in Set_Defaults_Model()