Searched refs:n_mixt_classes (Results 1 – 5 of 5) sorted by relevance
/dports/biology/phyml/phyml-3.3.20200621/src/ |
H A D | make.c | 29 …t = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeof(phydbl… in Make_Tree_For_Lk() 30 …ite_lk_cat = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->n_patte… in Make_Tree_For_Lk() 44 …tree->expl = _aligned_malloc(3*MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->mod->ns… in Make_Tree_For_Lk() 47 …tree->eigen_lr_left = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree… in Make_Tree_For_Lk() 48 …tree->eigen_lr_rght = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree… in Make_Tree_For_Lk() 50 …tree->expl = (phydbl *)mCalloc(3*MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->mod->… in Make_Tree_For_Lk() 270 …b->sum_scale_left_cat = (int *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeo… in Make_Edge_Lk_Left() 273 …)mCalloc(tree->data->crunch_len*MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeof(int)); in Make_Edge_Lk_Left() 340 …b->sum_scale_rght_cat = (int *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeo… in Make_Edge_Lk_Rght() 411 …tree->sum_scale_cat_extra_0 = (int *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)… in Make_Extra_Edge_Lk() [all …]
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H A D | mixt.c | 799 … = (phydbl *)mCalloc(MAX(mixt_tree->mod->ras->n_catg,mixt_tree->mod->n_mixt_classes),sizeof(phydbl… in MIXT_Lk() 800 … = (phydbl *)mCalloc(MAX(mixt_tree->mod->ras->n_catg,mixt_tree->mod->n_mixt_classes),sizeof(phydbl… in MIXT_Lk() 2536 …t = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes),sizeof(phydbl… in MIXT_Make_Tree_For_Lk() 2537 …ite_lk_cat = (phydbl *)mCalloc(MAX(tree->mod->ras->n_catg,tree->mod->n_mixt_classes)*tree->n_patte… in MIXT_Make_Tree_For_Lk() 2543 …if(posix_memalign((void **)&tree->expl,BYTE_ALIGN,(size_t)2*tree->mod->n_mixt_classes*tree->mod->n… in MIXT_Make_Tree_For_Lk() 2545 … tree->expl = _aligned_malloc(2*tree->mod->n_mixt_classes*tree->mod->ns*sizeof(phydbl),BYTE_ALIGN); in MIXT_Make_Tree_For_Lk() 2548 tree->expl = (phydbl *)mCalloc(2*tree->mod->n_mixt_classes*tree->mod->ns,sizeof(phydbl)); in MIXT_Make_Tree_For_Lk()
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H A D | utilities.h | 1146 int n_mixt_classes; /* Number of classes in the mixture model. */ member
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H A D | xml.c | 568 iomod->n_mixt_classes++; in XML_Process_Base()
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H A D | init.c | 643 mod->n_mixt_classes = 0; in Set_Defaults_Model()
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