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Searched refs:nbrfOutFile (Results 1 – 2 of 2) sorted by relevance

/dports/biology/clustalw/clustalw-2.1/src/alignment/
H A DAlignmentOutput.cpp151 if(nbrfOutFile.get() != 0 && nbrfOutFile->is_open()) in createAlignmentOutput()
154 if(nbrfOutFile->is_open()) in createAlignmentOutput()
156 nbrfOutFile->close(); in createAlignmentOutput()
1498 (*nbrfOutFile) << namePrefix; in nbrfOut()
1543 (*nbrfOutFile) << sequence[j - 1]; in nbrfOut()
1546 (*nbrfOutFile) << "\n"; in nbrfOut()
1549 (*nbrfOutFile) << "*\n"; in nbrfOut()
1551 nbrfOutFile->close(); in nbrfOut()
1555 nbrfOutFile->close(); in nbrfOut()
1562 nbrfOutFile->close(); in nbrfOut()
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H A DAlignmentOutput.h77 auto_ptr<ofstream> nbrfOutFile; variable