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Searched refs:ns_total (Results 1 – 25 of 58) sorted by relevance

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/dports/biology/gemma/GEMMA-0.98.3/src/
H A Dldr.cpp59 ns_total = cPar.ns_total; in CopyFromParam()
H A Dprdt.cpp63 ns_total = cPar.ns_total; in CopyFromParam()
228 for (size_t t = 0; t < ns_total; ++t) { in AnalyzeBimbam()
230 if (t % d_pace == 0 || t == (ns_total - 1)) { in AnalyzeBimbam()
231 ProgressBar("Reading SNPs ", t, ns_total - 1); in AnalyzeBimbam()
H A Dvc.cpp77 ns_total = cPar.ns_total; in CopyFromParam()
106 cPar.ns_total = ns_total; in CopyToParam()
778 ns_total++; in ReadFile_cor()
814 ns_total = 0; in ReadFile_beta()
982 ns_total++; in ReadFile_beta()
1053 ns_total = 0; in ReadFile_cor()
1125 d2 * d2 / ((double)vec_n[ns_total] * (double)vec_n[ns_total]); in ReadFile_cor()
1133 d2 * d2 / ((double)vec_n[ns_total] * (double)vec_n[ns_total]); in ReadFile_cor()
1156 1.0 / (double)min(vec_n[ns_total], vec_n[ns_total + n_nb + 1]); in ReadFile_cor()
1159 n12 = min(vec_n[ns_total], vec_n[ns_total + n_nb + 1]); in ReadFile_cor()
[all …]
H A Dldr.h43 size_t ni_total, ns_total; // Total number of individuals & SNPs. variable
H A Dprdt.h51 size_t ns_total; variable
H A Dlm.h46 size_t ns_total, ns_test; // Number of SNPs. variable
H A Dlm.cpp62 ns_total = cPar.ns_total; in CopyFromParam()
423 if (t % d_pace == 0 || t == (ns_total - 1)) { in AnalyzeBimbam()
424 ProgressBar("Reading SNPs", t, ns_total - 1); in AnalyzeBimbam()
H A Dmvlmm.h59 size_t ns_total, ns_test; // Number of SNPs. variable
H A Dbslmmdap.h53 size_t ni_total, ns_total; // Number of total individuals and SNPs. variable
H A Dlmm.h72 size_t ns_total, ns_test; // Number of SNPs. variable
H A Dgemma_io.cpp867 size_t ns_total = snpInfo.size(); in ReadFile_bed() local
920 for (size_t t = 0; t < ns_total; ++t) { in ReadFile_bed()
1755 for (int i = 0; i < ns_total; ++i) { in ReadFile_geno()
1860 size_t ns_total = indicator_snp.size(); in ReadFile_geno() local
1865 for (size_t i = 0; i < ns_total; ++i) { in ReadFile_geno()
1953 size_t ns_total = indicator_snp.size(); in ReadFile_bed() local
1981 for (size_t t = 0; t < ns_total; ++t) { in ReadFile_bed()
2091 size_t ns_total = indicator_snp.size(); in ReadFile_bed() local
3358 ns_total = 0; in ReadFile_beta()
3527 ns_total++; in ReadFile_beta()
[all …]
H A Dvc.h62 size_t ni_total, ns_total, ns_test; variable
H A Dbslmm.h70 size_t ni_total, ns_total; // Number of total individuals and SNPs variable
H A Dbslmmdap.cpp82 ns_total = cPar.ns_total; in CopyFromParam()
386 for (size_t i = 0; i < ns_total; ++i) { in WriteResult()
H A Dparam.cpp188 if (CountFileLines(file_geno, ns_total) == false) { in ReadFiles()
288 ns_total = indicator_snp.size(); in ReadFiles()
324 ns_total = indicator_snp.size(); in ReadFiles()
378 ns_total += indicator_snp.size(); in ReadFiles()
431 ns_total += indicator_snp.size(); in ReadFiles()
1125 cout << "## number of total SNPs/var = " << setw(8) << ns_total << endl; in CheckData()
H A Dparam.h240 size_t ns_total, ns_test, ns_study, ns_ref; variable
H A Dgemma_io.h164 vector<double> &vec_z2, size_t &ni_total, size_t &ns_total,
/dports/lang/spidermonkey60/firefox-60.9.0/third_party/python/scandir/
H A D_scandir.c446 PyObject *ns_total = NULL; in fill_time() local
456 ns_total = PyNumber_Add(s_in_ns, ns_fractional); in fill_time()
457 if (!ns_total) in fill_time()
472 PyStructSequence_SET_ITEM(v, index+6, ns_total); in fill_time()
475 ns_total = NULL; in fill_time()
480 Py_XDECREF(ns_total); in fill_time()
/dports/sysutils/py-scandir/scandir-1.10.0/
H A D_scandir.c446 PyObject *ns_total = NULL; in fill_time() local
456 ns_total = PyNumber_Add(s_in_ns, ns_fractional); in fill_time()
457 if (!ns_total) in fill_time()
472 PyStructSequence_SET_ITEM(v, index+6, ns_total); in fill_time()
475 ns_total = NULL; in fill_time()
480 Py_XDECREF(ns_total); in fill_time()
/dports/lang/spidermonkey78/firefox-78.9.0/third_party/python/scandir/
H A D_scandir.c446 PyObject *ns_total = NULL; in fill_time() local
456 ns_total = PyNumber_Add(s_in_ns, ns_fractional); in fill_time()
457 if (!ns_total) in fill_time()
472 PyStructSequence_SET_ITEM(v, index+6, ns_total); in fill_time()
475 ns_total = NULL; in fill_time()
480 Py_XDECREF(ns_total); in fill_time()
/dports/dns/bind9-devel/bind9-e112afa15668bd3b1baed59df2d21e01b46da15e/bin/nsupdate/
H A Dnsupdate.c150 static int ns_total = 0; variable
235 master_total = ns_total; in master_from_servers()
843 ns_total = ns_alloc = (have_ipv4 ? 1 : 0) + (have_ipv6 ? 1 : 0); in setup_system()
865 ns_total = 0; in setup_system()
871 ns_total++; in setup_system()
876 ns_total++; in setup_system()
884 ns_alloc = ns_total; in setup_system()
1518 ns_total = get_addresses(server, (in_port_t)port, servers, ns_alloc); in evaluate_server()
1519 if (ns_total == 0) { in evaluate_server()
2527 if (++ns_inuse >= ns_total) { in next_server()
/dports/dns/bind916/bind-9.16.27/bin/nsupdate/
H A Dnsupdate.c172 static int ns_total = 0; variable
257 master_total = ns_total; in master_from_servers()
867 ns_total = ns_alloc = (have_ipv4 ? 1 : 0) + (have_ipv6 ? 1 : 0); in setup_system()
889 ns_total = 0; in setup_system()
895 ns_total++; in setup_system()
900 ns_total++; in setup_system()
908 ns_alloc = ns_total; in setup_system()
1556 ns_total = get_addresses(server, (in_port_t)port, servers, ns_alloc); in evaluate_server()
1557 if (ns_total == 0) { in evaluate_server()
2572 if (++ns_inuse >= ns_total) { in next_server()
/dports/dns/samba-nsupdate/bind-9.16.5/bin/nsupdate/
H A Dnsupdate.c156 static int ns_total = 0; variable
241 master_total = ns_total; in master_from_servers()
855 ns_total = ns_alloc = (have_ipv4 ? 1 : 0) + (have_ipv6 ? 1 : 0); in setup_system()
877 ns_total = 0; in setup_system()
883 ns_total++; in setup_system()
888 ns_total++; in setup_system()
896 ns_alloc = ns_total; in setup_system()
1549 ns_total = get_addresses(server, (in_port_t)port, servers, ns_alloc); in evaluate_server()
1550 if (ns_total == 0) { in evaluate_server()
2550 if (++ns_inuse >= ns_total) { in next_server()
/dports/dns/bind-tools/bind-9.16.27/bin/nsupdate/
H A Dnsupdate.c172 static int ns_total = 0; variable
257 master_total = ns_total; in master_from_servers()
867 ns_total = ns_alloc = (have_ipv4 ? 1 : 0) + (have_ipv6 ? 1 : 0); in setup_system()
889 ns_total = 0; in setup_system()
895 ns_total++; in setup_system()
900 ns_total++; in setup_system()
908 ns_alloc = ns_total; in setup_system()
1556 ns_total = get_addresses(server, (in_port_t)port, servers, ns_alloc); in evaluate_server()
1557 if (ns_total == 0) { in evaluate_server()
2572 if (++ns_inuse >= ns_total) { in next_server()
/dports/dns/bind911/bind-9.11.37/bin/nsupdate/
H A Dnsupdate.c180 static int ns_total = 0; variable
327 master_total = ns_total; in master_from_servers()
952 ns_total = ns_alloc = (have_ipv4 ? 1 : 0) + (have_ipv6 ? 1 : 0); in setup_system()
968 ns_total = ns_alloc = lwconf->nsnext; in setup_system()
972 for (i = 0; i < ns_total; i++) { in setup_system()
1567 ns_total = get_addresses(server, (in_port_t)port, servers, ns_alloc); in evaluate_server()
1568 if (ns_total == 0) { in evaluate_server()
2534 if (++ns_inuse >= ns_total) in next_server()

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