Searched refs:nuc_var_str (Results 1 – 1 of 1) sorted by relevance
2552 string nuc_var_str = nuc_var_prefix + downstream_cds_suffix_seq_str; in TranslateNAtoAA() local2555 …string prot_var_str = Translate(nuc_var_str, p->GetMol() == CVariantPlacement::eMol_mitochondrion); in TranslateNAtoAA()2561 << "nuc_var_str: " << nuc_var_str << "\n"; in TranslateNAtoAA()2738 << "; nuc_var_len: " << nuc_var_str.size() in TranslateNAtoAA()2739 << "; nuc_var_str: " << nuc_var_str in TranslateNAtoAA()2745 string adjusted_codons_str = nuc_var_str.substr( in TranslateNAtoAA()2746 min<int>(nuc_var_str.size(), common_prot_prefix_len * 3), in TranslateNAtoAA()