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Searched refs:numgenes (Results 1 – 6 of 6) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/api/
H A Dseqmgr.h794 Int4 numgenes; /* number of elements in genesByPos array */ member
H A Dseqmgr.c3879 bspextra->numgenes = 0; in SeqMgrClearBioseqExtraData()
7190 Int4 numgenes; in IndexRecordedFeatures() local
7299 … bspextra->genesByPos = SeqMgrBuildFeatureIndex (bsp, &(bspextra->numgenes), 0, FEATDEF_GENE); in IndexRecordedFeatures()
7336 numgenes = bspextra->numgenes; in IndexRecordedFeatures()
7337 if (genesByPos != NULL && numgenes > 0) { in IndexRecordedFeatures()
7339 genesByLocusTag = (SMFeatItemPtr PNTR) MemNew (sizeof (SMFeatItemPtr) * (numgenes + 1)); in IndexRecordedFeatures()
7343 for (i = 0; i < numgenes; i++) { in IndexRecordedFeatures()
8840 num = bspextra->numgenes; in SeqMgrGetBestOverlappingFeat()
9180 num = bspextra->numgenes; in SeqMgrGetFeatureByLabelEx()
9735 num = bspextra->numgenes; in SeqMgrGetNextFeatureEx()
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H A Dtofasta.c3686 Int2 numgenes; member
3700 (ndp->numgenes)++; in FindNMFeats()
3789 if (nd.numgenes != 1 || nd.numcds != 1 || nd.numprots < 1) return NULL; in FindNMDefLine()
3850 if (nd.numgenes < 1) return NULL; in FindNRDefLine()
7073 Int2 numgenes; member
7093 (nfp->numgenes)++; in x_FindNMFeats()
7195 if (nfd.numgenes != 1 || nfd.numcds != 1 || nfd.numprots < 1) return NULL; in x_TitleFromNM()
7255 if (nfd.numgenes < 1) return NULL; in x_TitleFromNR()
H A Dedutil.c5163 num = bspextra->numgenes; in SeqEdGetNextFeature()
/dports/biology/ncbi-toolkit/ncbi/demo/
H A Dcleanasn.c3546 Int2 numgenes; member
3566 (xfp->numgenes)++; in FindXMFeats()
3622 if (xfd.numgenes != 1 || xfd.numcds != 1 || xfd.numprots < 1) return NULL; in CreateSpecialXmTitle()
/dports/sysutils/py-diffoscope/diffoscope-204/tests/data/
H A Drdb_expected_diff9145 + numgenes = nrow(dat)
9175 + genomesize = numgenes)
9292 + numgenes = dat$genomesize
9293 + myx = round(righttable[, toplot] * numgenes/100,
9295 + mytest = prop.test(x = myx, n = rep(numgenes,