Searched refs:oldRLength (Results 1 – 1 of 1) sorted by relevance
| /dports/biology/mrbayes/MrBayes-3.2.7/src/ |
| H A D | proposal.c | 1127 MrBFlt minDepth, maxDepth, newLength, clockRate, x, oldQLength, oldRLength, in Move_AddBranch() local
1221 oldRLength = r->length; in Move_AddBranch()
1290 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[q->index], nu*oldRLength, tk02Rate[r->index]); in Move_AddBranch()
1319 … (*lnPriorRatio) -= LnProbGamma (oldRLength/igrvar, oldRLength/igrvar, igrRate[r->index]); in Move_AddBranch()
1358 MrBFlt minDepth, maxDepth, clockRate, x, oldPLength, oldQLength, oldRLength, in Move_DelBranch() local
1453 oldRLength = r->length; in Move_DelBranch()
1520 … (*lnPriorRatio) -= LnProbTK02LogNormal (tk02Rate[q->index], nu*oldRLength, tk02Rate[r->index]); in Move_DelBranch()
1547 … (*lnPriorRatio) -= LnProbGamma (oldRLength/igrvar, oldRLength/igrvar, igrRate[r->index]); in Move_DelBranch()
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