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Searched refs:omdptop (Results 1 – 16 of 16) sorted by relevance

/dports/biology/ncbi-toolkit/ncbi/sequin/
H A Dsequin4.c636 ObjMgrDataPtr omdptop; in DoOneSegFixup() local
802 ObjMgrDataPtr omdptop; in ConvertOneSetToSegSet() local
821 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in ConvertOneSetToSegSet()
2007 ObjMgrDataPtr omdptop; in RepackageParksInPartsSetForEntityID() local
2103 ObjMgrDataPtr omdptop; in UndoSegSet() local
2475 ObjMgrDataPtr omdptop; in RemoveSet() local
2605 ObjMgrDataPtr omdptop; in RemoveSetsInBioseqSet() local
5414 ObjMgrDataPtr omdptop; in ExplodeGroup() local
8332 ObjMgrDataPtr omdptop; in SetWithinGenBankSet() local
8397 ObjMgrDataPtr omdptop; in RemoveExtraneousSets() local
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H A Dsequin6.c1602 ObjMgrDataPtr omdptop; in SegregateItemsGenericCallback() local
1617 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in SegregateItemsGenericCallback()
1630 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in SegregateItemsGenericCallback()
1670 ObjMgrDataPtr omdptop; in SegregateByText_Callback() local
1698 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in SegregateByText_Callback()
1743 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in SegregateByText_Callback()
2059 ObjMgrDataPtr omdptop; in SegregateByFeatureOrDescriptor_Callback() local
2081 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in SegregateByFeatureOrDescriptor_Callback()
2112 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in SegregateByFeatureOrDescriptor_Callback()
2663 ObjMgrDataPtr omdptop; in SegregateById_Callback() local
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H A Dsequin7.c5673 ObjMgrDataPtr omdptop; in RemoveProteinsAndOptionallyRenormalize() local
5690 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in RemoveProteinsAndOptionallyRenormalize()
5713 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in RemoveProteinsAndOptionallyRenormalize()
8217 ObjMgrDataPtr omdptop; in ReorderBioseqSetByAccession() local
8223 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in ReorderBioseqSetByAccession()
8230 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in ReorderBioseqSetByAccession()
H A Dsequin5.c26966 ObjMgrDataPtr omdptop; in AddSepBackToSet() local
27036 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in AddSepBackToSet()
27054 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in AddSepBackToSet()
27190 ObjMgrDataPtr omdptop; in SequesterSets() local
27231 SaveSeqEntryObjMgrData (top_sep, &omdptop, &omdata); in SequesterSets()
27248 RestoreSeqEntryObjMgrData (top_sep, omdptop, &omdata); in SequesterSets()
27300 ObjMgrDataPtr omdptop; in SequesterClickableItem() local
27331 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in SequesterClickableItem()
27339 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in SequesterClickableItem()
H A Dsequin1.c12213 ObjMgrDataPtr omdptop = NULL; in SubtoolModeAsnTextFileRead() local
12235 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in SubtoolModeAsnTextFileRead()
12247 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in SubtoolModeAsnTextFileRead()
12909 ObjMgrDataPtr omdptop = NULL; in SMReadBioseqObj() local
12990 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in SMReadBioseqObj()
13004 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in SMReadBioseqObj()
H A Dsequin3.c17442 ObjMgrDataPtr omdptop; in InsertSetEntityID() local
17455 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in InsertSetEntityID()
17471 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in InsertSetEntityID()
H A Dsequin2.c5613 ObjMgrDataPtr omdptop; in ImportPhylipDialog() local
5661 SaveSeqEntryObjMgrData (ppp->sep, &omdptop, &omdata); in ImportPhylipDialog()
5664 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in ImportPhylipDialog()
/dports/biology/ncbi-toolkit/ncbi/demo/
H A Dtbl2asn.c3401 ObjMgrDataPtr omdptop; in ProcessOneAsn() local
3414 SaveSeqEntryObjMgrData (gsep, &omdptop, &omdata); in ProcessOneAsn()
3435 RestoreSeqEntryObjMgrData (gsep, omdptop, &omdata); in ProcessOneAsn()
3556 ObjMgrDataPtr omdptop; in ProcessRaw2Delt() local
3570 SaveSeqEntryObjMgrData (gsep, &omdptop, &omdata); in ProcessRaw2Delt()
3642 ObjMgrDataPtr omdptop; in ProcessGappedSet() local
3654 SaveSeqEntryObjMgrData (gsep, &omdptop, &omdata); in ProcessGappedSet()
4116 ObjMgrDataPtr omdptop; in ProcessPhrapAce() local
4169 SaveSeqEntryObjMgrData (gsep, &omdptop, &omdata); in ProcessPhrapAce()
4502 ObjMgrDataPtr omdptop; in ProcessDeltaSet() local
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H A Dnps2gps.c1770 ObjMgrDataPtr omdptop; in PromoteNonCoding() local
1818 SaveSeqEntryObjMgrData (top, &omdptop, &omdata); in PromoteNonCoding()
1835 RestoreSeqEntryObjMgrData (top, omdptop, &omdata); in PromoteNonCoding()
/dports/biology/ncbi-toolkit/ncbi/api/
H A Dalignval.c610 ObjMgrDataPtr omdptop; in delete_bioseqs() local
618 SaveSeqEntryObjMgrData (sep_top, &omdptop, &omdata); in delete_bioseqs()
640 RestoreSeqEntryObjMgrData (sep_top, omdptop, &omdata); in delete_bioseqs()
H A Dsqnutil2.c19145 ObjMgrDataPtr omdptop; in RemoveDuplicateNestedSetsForEntityIDNoUpdate() local
26312 ObjMgrDataPtr omdp, omdptop = NULL; in SaveSeqEntryObjMgrData() local
26322 if (omdptop == NULL) return; in SaveSeqEntryObjMgrData()
26323 if (omdptop->EntityID == 0) return; in SaveSeqEntryObjMgrData()
26324 *omdptopptr = omdptop; in SaveSeqEntryObjMgrData()
26326 omdptop->userdata = NULL; in SaveSeqEntryObjMgrData()
26345 if (omdpnew != omdptop) { in RestoreSeqEntryObjMgrData()
26347 omdptop->EntityID = 0; in RestoreSeqEntryObjMgrData()
26377 ObjMgrDataPtr omdptop; in AddSeqEntryToSeqEntry() local
26575 ObjMgrDataPtr omdptop; in ReplaceSeqEntryWithSeqEntry() local
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H A Dsqnutil1.c751 ObjMgrDataPtr omdptop; in RenormalizeNucProtSets() local
777 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in RenormalizeNucProtSets()
830 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in RenormalizeNucProtSets()
866 ObjMgrDataPtr omdptop; in RemoveSingleItemSet() local
891 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in RemoveSingleItemSet()
941 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in RemoveSingleItemSet()
2167 ObjMgrDataPtr omdptop; in PromoteXrefsExEx() local
2283 SaveSeqEntryObjMgrData (target, &omdptop, &omdata); in PromoteXrefsExEx()
2447 RestoreSeqEntryObjMgrData (target, omdptop, &omdata); in PromoteXrefsExEx()
2671 SaveSeqEntryObjMgrData (target, &omdptop, &omdata); in PromoteXrefsExEx()
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H A Dsqnutil4.c19005 ObjMgrDataPtr omdptop; in PromoteSingletonSetsInSet() local
19017 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in PromoteSingletonSetsInSet()
19047 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in PromoteSingletonSetsInSet()
19055 ObjMgrDataPtr omdptop; in MakeGroupsForUniqueValues() local
19074 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in MakeGroupsForUniqueValues()
19126 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in MakeGroupsForUniqueValues()
19251 ObjMgrDataPtr omdptop; in MoveSequencesFromSetToWrapper() local
19272 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in MoveSequencesFromSetToWrapper()
19277 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in MoveSequencesFromSetToWrapper()
H A Dsqnutils.h161 NLM_EXTERN void RestoreSeqEntryObjMgrData (SeqEntryPtr target, ObjMgrDataPtr omdptop, ObjMgr…
H A Dsqnutil3.c3384 ObjMgrDataPtr omdptop; in ConvertSegSetsToDeltaSequencesInt() local
3401 SaveSeqEntryObjMgrData (sep, &omdptop, &omdata); in ConvertSegSetsToDeltaSequencesInt()
3461 RestoreSeqEntryObjMgrData (sep, omdptop, &omdata); in ConvertSegSetsToDeltaSequencesInt()
26508 ObjMgrDataPtr omdptop; in RemoveDoubleGenBankSets() local
26520 SaveSeqEntryObjMgrData (top_sep, &omdptop, &omdata); in RemoveDoubleGenBankSets()
26530 RestoreSeqEntryObjMgrData (top_sep, omdptop, &omdata); in RemoveDoubleGenBankSets()
/dports/biology/ncbi-toolkit/ncbi/desktop/
H A Dsalsa.c6981 ObjMgrDataPtr omdptop; in delete_bioseqs() local
6989 SaveSeqEntryObjMgrData (sep_top, &omdptop, &omdata); in delete_bioseqs()
7011 RestoreSeqEntryObjMgrData (sep_top, omdptop, &omdata); in delete_bioseqs()