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Searched refs:p7_ARCH_FAST (Results 1 – 9 of 9) sorted by relevance

/dports/biology/ugene/ugene-40.1/src/plugins/external_tool_support/src/hmmer/
H A DHmmerBuildTask.cpp62 case HmmerBuildSettings::p7_ARCH_FAST: in getReport()
134 case HmmerBuildSettings::p7_ARCH_FAST: in getArguments()
H A DHmmerBuildSettings.h32 p7_ARCH_FAST, // --fast: assign cols >= symfrac residues as consensus enumerator
H A DHmmerBuildSettings.cpp29 : modelConstructionStrategy(p7_ARCH_FAST), in HmmerBuildSettings()
H A DHmmerBuildDialog.cpp151 model.buildSettings.modelConstructionStrategy = HmmerBuildSettings::p7_ARCH_FAST; in getModelValues()
H A DHmmerBuildTaskTest.cpp96 settings.modelConstructionStrategy = HmmerBuildSettings::p7_ARCH_FAST; in setModelConstructionOption()
/dports/biology/infernal/infernal-1.1.3/hmmer/src/
H A Dp7_builder.c69 bld->arch_strategy = p7_ARCH_FAST; in p7_builder_Create()
76 if (esl_opt_GetBoolean(go, "--fast")) bld->arch_strategy = p7_ARCH_FAST; in p7_builder_Create()
836 if (bld->arch_strategy == p7_ARCH_FAST) in build_model()
H A Dhmmer.h1261 enum p7_archchoice_e { p7_ARCH_FAST = 0, p7_ARCH_HAND = 1 }; enumerator
/dports/biology/hmmer/hmmer-3.3/src/
H A Dp7_builder.c69 bld->arch_strategy = p7_ARCH_FAST; in p7_builder_Create()
76 if (esl_opt_GetBoolean(go, "--fast")) bld->arch_strategy = p7_ARCH_FAST; in p7_builder_Create()
836 if (bld->arch_strategy == p7_ARCH_FAST) in build_model()
H A Dhmmer.h1261 enum p7_archchoice_e { p7_ARCH_FAST = 0, p7_ARCH_HAND = 1 }; enumerator