Searched refs:p7_HMMFILE_3a (Results 1 – 7 of 7) sorted by relevance
| /dports/biology/infernal/infernal-1.1.3/hmmer/src/ |
| H A D | hmmconvert.c | 45 if (strcmp(outfmt, "3/a") == 0) fmtcode = p7_HMMFILE_3a; in main()
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| H A D | p7_hmmfile.c | 245 …else if (strcmp("HMMER3/a", tok) == 0) { hfp->format = p7_HMMFILE_3a; hfp->parser = read_asc30hmm;… in p7_hmmfile_OpenBuffer()
431 if (magic.n == v3a_magic) { hfp->format = p7_HMMFILE_3a; hfp->parser = read_bin30hmm; } in open_engine()
455 …else if (strcmp("HMMER3/a", tok) == 0) { hfp->format = p7_HMMFILE_3a; hfp->parser = read_asc30hmm;… in open_engine()
606 if (format == p7_HMMFILE_3a) { /* reverse compatibility */ in p7_hmmfile_WriteASCII()
760 ((format == p7_HMMFILE_3a) ? ( 75 + sprintf(buff, "%f", hmm->evparam[p7_MLAMBDA]) + in p7_hmmfile_WriteToString()
885 if (format == p7_HMMFILE_3a){ in p7_hmmfile_WriteToString()
1099 if (format == p7_HMMFILE_3a) in p7_hmmfile_WriteBinary()
1461 else if (hfp->format == p7_HMMFILE_3a) /* reverse compatibility with 30a */ in read_asc30hmm()
1662 …else if (hfp->format == p7_HMMFILE_3a) { if (magic != v3a_magic) ESL_XFAIL(eslEFORMAT, hfp->errbu… in read_bin30hmm()
1721 } else if (hfp->format == p7_HMMFILE_3a) { in read_bin30hmm()
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| H A D | hmmer.h | 403 p7_HMMFILE_3a = 1, enumerator
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| /dports/biology/hmmer/hmmer-3.3/src/ |
| H A D | hmmconvert.c | 45 if (strcmp(outfmt, "3/a") == 0) fmtcode = p7_HMMFILE_3a; in main()
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| H A D | p7_hmmfile.c | 245 …else if (strcmp("HMMER3/a", tok) == 0) { hfp->format = p7_HMMFILE_3a; hfp->parser = read_asc30hmm;… in p7_hmmfile_OpenBuffer()
431 if (magic.n == v3a_magic) { hfp->format = p7_HMMFILE_3a; hfp->parser = read_bin30hmm; } in open_engine()
455 …else if (strcmp("HMMER3/a", tok) == 0) { hfp->format = p7_HMMFILE_3a; hfp->parser = read_asc30hmm;… in open_engine()
606 if (format == p7_HMMFILE_3a) { /* reverse compatibility */ in p7_hmmfile_WriteASCII()
760 ((format == p7_HMMFILE_3a) ? ( 75 + sprintf(buff, "%f", hmm->evparam[p7_MLAMBDA]) + in p7_hmmfile_WriteToString()
885 if (format == p7_HMMFILE_3a){ in p7_hmmfile_WriteToString()
1099 if (format == p7_HMMFILE_3a) in p7_hmmfile_WriteBinary()
1461 else if (hfp->format == p7_HMMFILE_3a) /* reverse compatibility with 30a */ in read_asc30hmm()
1662 …else if (hfp->format == p7_HMMFILE_3a) { if (magic != v3a_magic) ESL_XFAIL(eslEFORMAT, hfp->errbu… in read_bin30hmm()
1721 } else if (hfp->format == p7_HMMFILE_3a) { in read_bin30hmm()
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| H A D | hmmer.h | 403 p7_HMMFILE_3a = 1, enumerator
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| /dports/biology/infernal/infernal-1.1.3/src/ |
| H A D | cm_file.c | 1146 …if (magic == v3a_magic) { cmfp->hfp->format = p7_HMMFILE_3a; cmfp->hfp->parser = read_bin30hm… in cm_p7_hmmfile_Read()
1165 …else if (strcmp("HMMER3/a", tok1) == 0) { cmfp->hfp->format = p7_HMMFILE_3a; cmfp->hfp->parser = r… in cm_p7_hmmfile_Read()
2830 …else if (hfp->format == p7_HMMFILE_3a) { if (strcmp(tag, "HMMER3/a") != 0) ESL_XFAIL(eslEFORMA… in read_asc30hmm()
2962 else if (hfp->format == p7_HMMFILE_3a) /* reverse compatibility with 30a */ in read_asc30hmm()
3163 …else if (hfp->format == p7_HMMFILE_3a) { if (magic != v3a_magic) ESL_XFAIL(eslEFORMAT, hfp->errbu… in read_bin30hmm()
3222 } else if (hfp->format == p7_HMMFILE_3a) { in read_bin30hmm()
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