| /dports/science/openems/openEMS-0.0.35-71-g4c24b6e/tools/ |
| H A D | sar_calculation.cpp | 334 partial_stop[n]=1; in GetCubicalMass()
345 partial_stop[n]=-1; in GetCubicalMass()
352 if (partial_stop[n]!=-1) in GetCubicalMass()
365 if (partial_stop[n]==-1) in GetCubicalMass()
381 weight[0]*=abs(partial_stop[0]); in GetCubicalMass()
389 weight[1]*=abs(partial_stop[1]); in GetCubicalMass()
397 weight[2]*=abs(partial_stop[2]); in GetCubicalMass()
438 weight[0]*=abs(partial_stop[0]); in CalcCubicalSAR()
446 weight[1]*=abs(partial_stop[1]); in CalcCubicalSAR()
454 weight[2]*=abs(partial_stop[2]); in CalcCubicalSAR()
[all …]
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| H A D | sar_calculation.h | 110 …float partial_start[3], float partial_stop[3], double &mass, double &volume, double &bg_ratio, int…
112 …float partial_start[3], float partial_stop[3], double &mass, double &volume, double &bg_ratio, int…
114 …ned int start[3], unsigned int stop[3], float partial_start[3], float partial_stop[3], bool assign…
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objmgr/util/ |
| H A D | feature_edit.cpp | 213 bool partial_stop = false; in x_TrimLocation() local
239 partial_stop = true; in x_TrimLocation()
261 partial_stop = true; in x_TrimLocation()
271 swap(partial_start, partial_stop); in x_TrimLocation()
279 if (partial_stop) { in x_TrimLocation()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objmgr/util/ |
| H A D | feature_edit.cpp | 213 bool partial_stop = false; in x_TrimLocation() local
239 partial_stop = true; in x_TrimLocation()
261 partial_stop = true; in x_TrimLocation()
271 swap(partial_start, partial_stop); in x_TrimLocation()
279 if (partial_stop) { in x_TrimLocation()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/include/objtools/edit/ |
| H A D | seq_entry_edit.hpp | 286 bool& partial_stop);
315 bool partial_stop,
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/include/objtools/edit/ |
| H A D | seq_entry_edit.hpp | 286 bool& partial_stop);
315 bool partial_stop,
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| /dports/graphics/birdfont/birdfont-2.29.5/libbirdfont/Renderer/ |
| H A D | TextArea.vala | 1098 bool partial_stop = false;
1107 partial_stop = true;
1115 partial_stop = !paint_background;
1118 if (paint_background && !(partial_start || partial_stop)) {
1124 if (partial_start || partial_stop) {
1131 bool draw = (index >= selection_start.character_index && partial_start && !partial_stop)
1132 || (index < selection_stop.character_index && !partial_start && partial_stop)
1133 …_start.character_index <= index < selection_stop.character_index && partial_start && partial_stop);
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/ |
| H A D | seq_entry_edit.cpp | 3060 …eq_loc& loc, CRef<CSeq_feat> feat, CSeq_loc::TStrand strand, bool partial_start, bool partial_stop) in SetPartial() argument
3063 swap(partial_start, partial_stop); in SetPartial()
3069 if (partial_stop) { in SetPartial()
3073 if (partial_start || partial_stop) { in SetPartial()
3080 …sorted_cuts, bool& bFeatureDeleted, bool& bFeatureTrimmed, bool& partial_start, bool& partial_stop) in TrimSeqFeat() argument
3103 partial_stop = true; in TrimSeqFeat()
3112 SetPartial(feat->SetLocation(), feat, strand, partial_start, partial_stop); in TrimSeqFeat()
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| H A D | loc_edit.cpp | 525 bool partial_stop = last_loc->IsPartialStop(eExtreme_Biological); in SeqLocExtend3() local
534 add->SetPartialStop(partial_stop, eExtreme_Positional); in SeqLocExtend3()
538 add->SetPartialStart(partial_stop, eExtreme_Positional); in SeqLocExtend3()
551 bool partial_stop = loc.IsPartialStop(eExtreme_Positional); in SeqLocExtend() local
568 add->SetPartialStop(partial_stop, eExtreme_Positional); in SeqLocExtend()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/edit/ |
| H A D | seq_entry_edit.cpp | 3060 …eq_loc& loc, CRef<CSeq_feat> feat, CSeq_loc::TStrand strand, bool partial_start, bool partial_stop) in SetPartial() argument
3063 swap(partial_start, partial_stop); in SetPartial()
3069 if (partial_stop) { in SetPartial()
3073 if (partial_start || partial_stop) { in SetPartial()
3080 …sorted_cuts, bool& bFeatureDeleted, bool& bFeatureTrimmed, bool& partial_start, bool& partial_stop) in TrimSeqFeat() argument
3103 partial_stop = true; in TrimSeqFeat()
3112 SetPartial(feat->SetLocation(), feat, strand, partial_start, partial_stop); in TrimSeqFeat()
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| H A D | loc_edit.cpp | 525 bool partial_stop = last_loc->IsPartialStop(eExtreme_Biological); in SeqLocExtend3() local
534 add->SetPartialStop(partial_stop, eExtreme_Positional); in SeqLocExtend3()
538 add->SetPartialStart(partial_stop, eExtreme_Positional); in SeqLocExtend3()
551 bool partial_stop = loc.IsPartialStop(eExtreme_Positional); in SeqLocExtend() local
568 add->SetPartialStop(partial_stop, eExtreme_Positional); in SeqLocExtend()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/edit/unit_test/ |
| H A D | unit_test_loc_edit.cpp | 1946 void CheckAdjustStop(TSeqPos stop, TSeqPos expect_stop, bool partial_stop, bool is_minus = false) in CheckAdjustStop() argument
1960 cds->SetLocation().SetPartialStop(partial_stop, eExtreme_Biological); in CheckAdjustStop()
1983 bool partial_stop, in CheckAdjustStartAndStop() argument
1997 cds->SetLocation().SetPartialStop(partial_stop, eExtreme_Biological); in CheckAdjustStartAndStop()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/cleanup/ |
| H A D | cleanup.cpp | 1085 bool partial_stop = loc.IsPartialStop(eExtreme_Positional); in SeqLocExtend() local
1101 add->SetPartialStop(partial_stop, eExtreme_Positional); in SeqLocExtend()
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| H A D | newcleanupp.cpp | 11728 bool partial_stop = loc.IsPartialStop(eExtreme_Biological); in x_ExtendFeatureToCoverSequence() local
11738 new_loc.SetPartialStop(partial_stop, eExtreme_Biological); in x_ExtendFeatureToCoverSequence()
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| /dports/biology/ncbi-blast+/ncbi-blast-2.12.0+-src/c++/src/objtools/cleanup/ |
| H A D | cleanup.cpp | 1085 bool partial_stop = loc.IsPartialStop(eExtreme_Positional); in SeqLocExtend() local
1101 add->SetPartialStop(partial_stop, eExtreme_Positional); in SeqLocExtend()
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| H A D | newcleanupp.cpp | 11660 bool partial_stop = loc.IsPartialStop(eExtreme_Biological); in x_ExtendFeatureToCoverSequence() local
11670 new_loc.SetPartialStop(partial_stop, eExtreme_Biological); in x_ExtendFeatureToCoverSequence()
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| /dports/biology/ncbi-cxx-toolkit/ncbi_cxx--25_2_0/src/objtools/validator/ |
| H A D | validerror_bioseq.cpp | 5708 bool partial_stop = loc.IsPartialStop(eExtreme_Positional); in x_PartialAdjacentToIntron() local
5709 if (!partial_start && !partial_stop) { in x_PartialAdjacentToIntron()
5731 if (intron_start == stop + 1 && partial_stop) { in x_PartialAdjacentToIntron()
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