Searched refs:pattern_lh_cat (Results 1 – 3 of 3) sorted by relevance
282 double *pattern_lh_cat = NULL, SiteLoglType wsl = WSL_RATECAT);
1061 double *pattern_lh_cat = NULL, SiteLoglType wsl = WSL_RATECAT);
5534 double *pattern_lh, *pattern_lh_cat; in writeSiteLh() local5536 pattern_lh_cat = aligned_alloc<double>(getAlnNPattern()*ncat); in writeSiteLh()5537 computePatternLikelihood(pattern_lh, NULL, pattern_lh_cat, wsl); in writeSiteLh()5544 out << "\t" << pattern_lh_cat[ptn*ncat+j]; in writeSiteLh()5548 aligned_free(pattern_lh_cat); in writeSiteLh()