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Searched refs:pattern_lh_cat (Results 1 – 3 of 3) sorted by relevance

/dports/biology/iqtree/IQ-TREE-2.0.6/tree/
H A Dphylosupertree.h282 double *pattern_lh_cat = NULL, SiteLoglType wsl = WSL_RATECAT);
H A Dphylotree.h1061 double *pattern_lh_cat = NULL, SiteLoglType wsl = WSL_RATECAT);
H A Dphylotree.cpp5534 double *pattern_lh, *pattern_lh_cat; in writeSiteLh() local
5536 pattern_lh_cat = aligned_alloc<double>(getAlnNPattern()*ncat); in writeSiteLh()
5537 computePatternLikelihood(pattern_lh, NULL, pattern_lh_cat, wsl); in writeSiteLh()
5544 out << "\t" << pattern_lh_cat[ptn*ncat+j]; in writeSiteLh()
5548 aligned_free(pattern_lh_cat); in writeSiteLh()