Searched refs:perSiteScores (Results 1 – 2 of 2) sorted by relevance
| /dports/biology/iqtree/IQ-TREE-2.0.6/pll/ |
| H A D | parsimony.c | 283 if (perSiteScores) in compressDNA()
421 compressDNA(tr, pr, informative, perSiteScores); in pllInitParsimonyStructures()
510 if (perSiteScores) in newviewParsimonyIterativeFast()
566 if (perSiteScores) in newviewParsimonyIterativeFast()
612 if (perSiteScores) in newviewParsimonyIterativeFast()
660 if (perSiteScores) in newviewParsimonyIterativeFast()
687 newviewParsimonyIterativeFast(tr, pr, perSiteScores); in evaluateParsimonyIterativeFast()
723 if (perSiteScores) in evaluateParsimonyIterativeFast()
752 if (perSiteScores) in evaluateParsimonyIterativeFast()
787 if (perSiteScores) in evaluateParsimonyIterativeFast()
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| H A D | pll.h | 1655 …arsimony(pllInstance *tr, partitionList *pr, nodeptr p, pllBoolean full, pllBoolean perSiteScores);
1656 void pllInitParsimonyStructures(pllInstance *tr, partitionList *pr, pllBoolean perSiteScores);
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