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Searched refs:pff (Results 1 – 25 of 272) sorted by relevance

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/dports/biology/jalview/jalview/test/jalview/ws/dbsources/
H A DXfamFetcherTest.java61 Pfam pff = new PfamFull(); in testPfamFullAndSeed() local
64 AlignmentI fullpf = pff.getSequenceRecords(pff.getTestQuery()); in testPfamFullAndSeed()
65 Assert.assertNotNull(fullpf, "Full Alignment for " + pff.getTestQuery() in testPfamFullAndSeed()
68 "Full Alignment for " + pff.getTestQuery() in testPfamFullAndSeed()
70 AlignmentI seedpf = pfseed.getSequenceRecords(pff.getTestQuery()); in testPfamFullAndSeed()
71 Assert.assertNotNull(seedpf, "Seed Alignment for " + pff.getTestQuery() in testPfamFullAndSeed()
79 + pff.getTestQuery()); in testPfamFullAndSeed()
81 "Full Alignment for " + pff.getTestQuery() in testPfamFullAndSeed()
/dports/editors/abiword/abiword-3.0.5/src/text/ptbl/xp/
H A Dpt_PT_Append.cpp456 pf_Frag_FmtMark * pff = NULL; in appendFmtMark() local
457 if (!_makeFmtMark(pff) || !pff) in appendFmtMark()
460 m_fragments.appendFrag(pff); in appendFmtMark()
588 pf_Frag_FmtMark * pff = NULL; in insertFmtMarkBeforeFrag() local
589 if (!_makeFmtMark(pff) || !pff) in insertFmtMarkBeforeFrag()
592 m_fragments.insertFragBefore(pF, pff); in insertFmtMarkBeforeFrag()
602 pf_Frag_FmtMark * pff = NULL; in insertFmtMarkBeforeFrag() local
603 if (!_makeFmtMark(pff,attributes) || !pff) in insertFmtMarkBeforeFrag()
681 if (!pff) in _makeFmtMark()
697 return _makeFmtMark(pff); in _makeFmtMark()
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/dports/science/mmtf-cpp/mmtf-cpp-1.0.0/examples/
H A Dtraverse.cpp25 void printval(const char* pff, const T& val) { in printval() argument
26 printf(pff, val); in printval()
29 void printval(const char* pff, const std::string& val) { in printval() argument
30 printf(pff, val.c_str()); in printval()
39 printval(pff, v[i]); in printvec()
46 void printreq(const char* label, const char* pff, in printreq() argument
49 printvec(pff, v, N); in printreq()
54 void printreq(const char* label, const char* pff, in printreq() argument
59 printreq(label, pff, &v[0], v.size(), last); in printreq()
82 void printopt(const char* label, const char* pff, in printopt() argument
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/dports/science/openbabel/openbabel-3.1.1/src/ops/
H A Dopconfab.cpp82 OBForceField *pff; member in OpenBabel::OpConfab
125 pff = OpenBabel::OBForceField::FindType("mmff94"); in Do()
126 if (!pff) { in Do()
146 bool success = pff->Setup(mol); in Run()
152 pff->DiverseConfGen(rmsd_cutoff, conf_cutoff, energy_cutoff, verbose); in Run()
154 pff->GetConformers(mol); in Run()
/dports/security/openvpn/openvpn-2.5.6/sample/sample-plugins/defer/
H A Dsimple.c330 const char *pff = get_env("pf_file", envp); in tls_final() local
332 if (!pff || !cn) /* required vars missing */ in tls_final()
402 int w_fd = open( pff, O_WRONLY|O_CREAT, 0600 ); in tls_final()
405 plugin_log(PLOG_ERR|PLOG_ERRNO, MODULE, "can't write to '%s'", pff); in tls_final()
433 plugin_log(PLOG_ERR|PLOG_ERRNO, MODULE, "error writing %d bytes to '%s'", r, pff); in tls_final()
441 plugin_log(PLOG_NOTE, MODULE, "copied PF config from '%s' to '%s', job done", buf, pff); in tls_final()
508 const char *pff = get_env("pf_file", envp); in openvpn_plugin_func_v3() local
509 if (pff) in openvpn_plugin_func_v3()
511 (void) unlink(pff); in openvpn_plugin_func_v3()
/dports/security/openvpn-devel/openvpn-0033811e0215af76f469d78912c95a2f59813454/sample/sample-plugins/defer/
H A Dsimple.c330 const char *pff = get_env("pf_file", envp); in tls_final() local
332 if (!pff || !cn) /* required vars missing */ in tls_final()
402 int w_fd = open( pff, O_WRONLY|O_CREAT, 0600 ); in tls_final()
405 plugin_log(PLOG_ERR|PLOG_ERRNO, MODULE, "can't write to '%s'", pff); in tls_final()
433 plugin_log(PLOG_ERR|PLOG_ERRNO, MODULE, "error writing %d bytes to '%s'", r, pff); in tls_final()
441 plugin_log(PLOG_NOTE, MODULE, "copied PF config from '%s' to '%s', job done", buf, pff); in tls_final()
508 const char *pff = get_env("pf_file", envp); in openvpn_plugin_func_v3() local
509 if (pff) in openvpn_plugin_func_v3()
511 (void) unlink(pff); in openvpn_plugin_func_v3()
/dports/security/openvpn-mbedtls/openvpn-2.5.6/sample/sample-plugins/defer/
H A Dsimple.c330 const char *pff = get_env("pf_file", envp); in tls_final() local
332 if (!pff || !cn) /* required vars missing */ in tls_final()
402 int w_fd = open( pff, O_WRONLY|O_CREAT, 0600 ); in tls_final()
405 plugin_log(PLOG_ERR|PLOG_ERRNO, MODULE, "can't write to '%s'", pff); in tls_final()
433 plugin_log(PLOG_ERR|PLOG_ERRNO, MODULE, "error writing %d bytes to '%s'", r, pff); in tls_final()
441 plugin_log(PLOG_NOTE, MODULE, "copied PF config from '%s' to '%s', job done", buf, pff); in tls_final()
508 const char *pff = get_env("pf_file", envp); in openvpn_plugin_func_v3() local
509 if (pff) in openvpn_plugin_func_v3()
511 (void) unlink(pff); in openvpn_plugin_func_v3()
/dports/science/openbabel/openbabel-3.1.1/test/
H A Dbuildertest.cpp47 OBForceField* pff = OBForceField::FindType("mmff94"); in doBuildMoleculeTest() local
48 OB_REQUIRE(pff != nullptr); in doBuildMoleculeTest()
50 OB_REQUIRE(pff->Setup(mol)); in doBuildMoleculeTest()
52 pff->SteepestDescent(100); in doBuildMoleculeTest()
53 OB_REQUIRE(!pff->DetectExplosion()); // no explosions please! in doBuildMoleculeTest()
/dports/devel/upp/upp/uppsrc/ide/Browser/
H A DTopicBase.cpp193 for(FindFile pff(AppendFileName(dir, "*.*")); pff && !IdeExit; pff.Next()) { in SyncRefsDir() local
194 if(pff.IsFolder() && *pff.GetName() != '.') { in SyncRefsDir()
198 tl.package = rel + pff.GetName(); in SyncRefsDir()
199 String pdir = AppendFileName(dir, pff.GetName()); in SyncRefsDir()
/dports/math/oleo/oleo-1.99.16/src/
H A Dio-utils.c513 char *pf, *pff, *pt; local
531 while (pf != pff);
545 while (pf != pff);
561 while (pf != pff);
575 while (pf != pff);
589 char *pf, *pff; local
635 pff = fmt->comma;
636 pf = pff + comlen;
639 while (pf != pff);
718 while (pf != pff);
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/dports/multimedia/v4l_compat/linux-5.13-rc2/include/uapi/linux/
H A Dswitchtec_ioctl.h70 uint32_t pff[48]; member
79 uint32_t pff[255]; member
141 uint32_t pff; member
/dports/multimedia/libv4l/linux-5.13-rc2/include/uapi/linux/
H A Dswitchtec_ioctl.h70 uint32_t pff[48]; member
79 uint32_t pff[255]; member
141 uint32_t pff; member
/dports/lang/zig/zig-0.9.0/lib/libc/include/any-linux-any/linux/
H A Dswitchtec_ioctl.h70 __u32 pff[48]; member
79 __u32 pff[255]; member
141 __u32 pff; member
/dports/lang/zig-devel/zig-0.9.0/lib/libc/include/any-linux-any/linux/
H A Dswitchtec_ioctl.h70 __u32 pff[48]; member
79 __u32 pff[255]; member
141 __u32 pff; member
/dports/multimedia/v4l-utils/linux-5.13-rc2/include/uapi/linux/
H A Dswitchtec_ioctl.h70 uint32_t pff[48]; member
79 uint32_t pff[255]; member
141 uint32_t pff; member
/dports/audio/mp3plot/mp3plot-0.6.0/src/
H A Dbitrate_dist.cc53 const mp3::frame_first * pff = reinterpret_cast<const mp3::frame_first*>(&f); in fill_from() local
57 if (is_vbr && !pff->is_tainted()) { in fill_from()
/dports/textproc/miller/miller-5.10.2/c/unit_test/
H A Dtest_rval_evaluators.c276 rval_evaluator_t* pff = rval_evaluator_alloc_from_b_bb_and_func(pf, pf); in test_logical_and() local
285 mv_t off = pff->pprocess_func(pff->pvstate, &variables); in test_logical_and()
341 rval_evaluator_t* pff = rval_evaluator_alloc_from_b_bb_or_func(pf, pf); in test_logical_or() local
351 mv_t off = pff->pprocess_func(pff->pvstate, &variables); in test_logical_or()
405 rval_evaluator_t* pff = rval_evaluator_alloc_from_b_bb_xor_func(pf, pf); in test_logical_xor() local
415 mv_t off = pff->pprocess_func(pff->pvstate, &variables); in test_logical_xor()
/dports/devel/upp/upp/uppsrc/ide/
H A DHelp.cpp45 for(FindFile pff(AppendFileName(dir, "*.*")); pff; pff.Next()) { in ScanDirForTpp() local
46 if(pff.IsFolder() && *pff.GetName() != '.') { in ScanDirForTpp()
47 String pdir = AppendFileName(dir, pff.GetName()); in ScanDirForTpp()
48 tl.package = rel + pff.GetName(); in ScanDirForTpp()
/dports/lang/swi-pl/swipl-8.2.3/src/Tests/xsb/delay_tests/
H A Dresidual1.P50 test(C,D) :- C = pff(_), gcr(C,D).
98 :- table pf/1, pff/1, pfff/1.
102 pff(X) :- Y = f(g(X),1,h(i(1,a),[1,2|_])), pf(Y).
104 pfff(X) :- pff(X), Y = f(g(X),_,h(i(1,a),[1|_])), pf(Y).
H A Dresidual1_old39 pff(a) :- pf(f(g(a),1,h(i(1,a),[1,2,3]))).
40 pfff(a) :- pf(f(g(a),1,h(i(1,a),[1,2,3]))), pff(a).
/dports/devel/upp/upp/bazaar/Functions4U/
H A DGatherTpp.cpp74 for(FindFile pff(AppendFileName(upp, "*.*")); pff; pff.Next()) { in GatherRefLinks() local
75 if(pff.IsFolder()) { in GatherRefLinks()
76 String package = pff.GetName(); in GatherRefLinks()
/dports/math/ccmath/ccmath-2.2.1/sort/test/data/
H A Dhash.dat1 ab 15 cat -7 dmm 13 fc 99 gh 23 fik 123 mss 37 pff -22
/dports/graphics/opencv/opencv-4.5.3/contrib/modules/tracking/src/
H A DPFSolver.hpp164 PFSolver::Function *pff=dynamic_cast<PFSolver::Function*>(f_ptr); in setFunction() local
165 CV_Assert(pff!=NULL); in setFunction()
167 _real_function=pff; in setFunction()
/dports/science/PETSc/petsc-3.14.1/src/vec/pf/interface/ftn-auto/
H A Dmakefile7 SOURCEC = pff.c
/dports/biology/ncbi-toolkit/ncbi/tools/
H A Dfalign.c451 MemFree(pff); in falign()
1064 pff->k = 0; in setup()
1118 pf_set(pff,mid2,se2+1); in global()
1127 if (cut[pff->j]) { in global()
1147 js = s_Join(pff,pbf); in global()
1148 if ((pff->j-pff->i != (pff->bgf)->j-(pff->bgf)->i) && in global()
1152 fse = pff->bgf; in global()
1158 --(pff->j); in global()
1175 if ((pff->j-pff->i != (pff->bgf)->j-(pff->bgf)->i) && in global()
1179 fse = pff->bgf; in global()
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