Searched refs:phen_buf (Results 1 – 4 of 4) sorted by relevance
/dports/biology/gcta/gcta_1.26.0_src/ |
H A D | bivar_reml.cpp | 32 vector< vector<string> > phen_buf, qcovar, covar; // save individuals by column in fit_bivar_reml() local 46 read_phen(phen_file, phen_ID, phen_buf, mphen, mphen2); in fit_bivar_reml() 85 if (phen_buf[i][mphen] != "NA" && phen_buf[i][mphen] != "-9") n1++; in fit_bivar_reml() 86 if (phen_buf[i][mphen2] != "NA" && phen_buf[i][mphen2] != "-9") n2++; in fit_bivar_reml() 87 ystr1[iter->second] = phen_buf[i][mphen]; in fit_bivar_reml() 88 ystr2[iter->second] = phen_buf[i][mphen2]; in fit_bivar_reml()
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H A D | mlm_assoc.cpp | 31 vector< vector<string> > phen_buf, qcovar, covar; // save individuals by column in mlma() local 34 read_phen(phen_file, phen_ID, phen_buf, mphen); in mlma() 88 _y[iter->second]=atof(phen_buf[i][mphen-1].c_str()); in mlma() 357 vector< vector<string> > phen_buf, qcovar, covar; // save individuals by column in mlma_loco() local 359 read_phen(phen_file, phen_ID, phen_buf, mphen); in mlma_loco() 420 _y[iter->second]=atof(phen_buf[i][mphen-1].c_str()); in mlma_loco()
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H A D | est_hsq.cpp | 40 void gcta::read_phen(string phen_file, vector<string> &phen_ID, vector< vector<string> > &phen_buf,… in read_phen() argument 49 phen_buf.clear(); in read_phen() 92 phen_buf.push_back(vs_buf); in read_phen() 95 …cout << "Non-missing phenotypes of " << phen_buf.size() << " individuals are included from [" + ph… in read_phen() 188 vector< vector<string> > phen_buf, qcovar, covar, GE, qGE; // save individuals by column in fit_reml() local 202 read_phen(phen_file, phen_ID, phen_buf, mphen); in fit_reml() 247 _y[iter->second] = atof(phen_buf[i][mphen - 1].c_str()); in fit_reml() 1487 vector< vector<string> > phen_buf; // save individuals by column in HE_reg() local 1491 read_phen(phen_file, phen_ID, phen_buf, mphen); in HE_reg() 1510 _y[iter->second] = atof(phen_buf[i][mphen - 1].c_str()); in HE_reg()
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H A D | gcta.h | 233 …void read_phen(string phen_file, vector<string> &phen_ID, vector< vector<string> > &phen_buf, int …
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