Home
last modified time | relevance | path

Searched refs:phen_buf (Results 1 – 4 of 4) sorted by relevance

/dports/biology/gcta/gcta_1.26.0_src/
H A Dbivar_reml.cpp32 vector< vector<string> > phen_buf, qcovar, covar; // save individuals by column in fit_bivar_reml() local
46 read_phen(phen_file, phen_ID, phen_buf, mphen, mphen2); in fit_bivar_reml()
85 if (phen_buf[i][mphen] != "NA" && phen_buf[i][mphen] != "-9") n1++; in fit_bivar_reml()
86 if (phen_buf[i][mphen2] != "NA" && phen_buf[i][mphen2] != "-9") n2++; in fit_bivar_reml()
87 ystr1[iter->second] = phen_buf[i][mphen]; in fit_bivar_reml()
88 ystr2[iter->second] = phen_buf[i][mphen2]; in fit_bivar_reml()
H A Dmlm_assoc.cpp31 vector< vector<string> > phen_buf, qcovar, covar; // save individuals by column in mlma() local
34 read_phen(phen_file, phen_ID, phen_buf, mphen); in mlma()
88 _y[iter->second]=atof(phen_buf[i][mphen-1].c_str()); in mlma()
357 vector< vector<string> > phen_buf, qcovar, covar; // save individuals by column in mlma_loco() local
359 read_phen(phen_file, phen_ID, phen_buf, mphen); in mlma_loco()
420 _y[iter->second]=atof(phen_buf[i][mphen-1].c_str()); in mlma_loco()
H A Dest_hsq.cpp40 void gcta::read_phen(string phen_file, vector<string> &phen_ID, vector< vector<string> > &phen_buf,… in read_phen() argument
49 phen_buf.clear(); in read_phen()
92 phen_buf.push_back(vs_buf); in read_phen()
95 …cout << "Non-missing phenotypes of " << phen_buf.size() << " individuals are included from [" + ph… in read_phen()
188 vector< vector<string> > phen_buf, qcovar, covar, GE, qGE; // save individuals by column in fit_reml() local
202 read_phen(phen_file, phen_ID, phen_buf, mphen); in fit_reml()
247 _y[iter->second] = atof(phen_buf[i][mphen - 1].c_str()); in fit_reml()
1487 vector< vector<string> > phen_buf; // save individuals by column in HE_reg() local
1491 read_phen(phen_file, phen_ID, phen_buf, mphen); in HE_reg()
1510 _y[iter->second] = atof(phen_buf[i][mphen - 1].c_str()); in HE_reg()
H A Dgcta.h233 …void read_phen(string phen_file, vector<string> &phen_ID, vector< vector<string> > &phen_buf, int …