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/dports/biology/py-goatools/goatools-1.1.6/goatools/test_data/
H A Dgjoneska_goea_late_increase.py461 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000015243']), pop_n=13836, pop_count=1…
484 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000027168']), pop_n=13836, pop_count=1…
489 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000075254']), pop_n=13836, pop_count=1…
968 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000062031']), pop_n=13836, pop_count=1…
1006 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000022125']), pop_n=13836, pop_count=1…
2094 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000014361']), pop_n=13836, pop_count=1…
2681 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000027239']), pop_n=13836, pop_count=1…
3296 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000026796']), pop_n=13836, pop_count=1…
5325 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000085793']), pop_n=13836, pop_count=1…
5342 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000050912']), pop_n=13836, pop_count=1…
[all …]
H A Dgjoneska_goea_late_decrease.py49 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000026354']), pop_n=13836, pop_count=1…
296 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000051790']), pop_n=13836, pop_count=2…
333 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000021270']), pop_n=13836, pop_count=2…
654 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000028222']), pop_n=13836, pop_count=1…
1112 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000051790']), pop_n=13836, pop_count=1…
2267 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000050751']), pop_n=13836, pop_count=1…
2793 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000039239']), pop_n=13836, pop_count=2…
2984 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000000308']), pop_n=13836, pop_count=1…
3938 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000030695']), pop_n=13836, pop_count=1…
4431 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000031012']), pop_n=13836, pop_count=1…
[all …]
H A Dgjoneska_goea_consistent_decrease.py49 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000032306']), pop_n=13836, pop_count=1…
194 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000048154']), pop_n=13836, pop_count=1…
334 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000023951']), pop_n=13836, pop_count=1…
2019 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000031622']), pop_n=13836, pop_count=1…
2069 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000048482']), pop_n=13836, pop_count=1…
2218 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000050379']), pop_n=13836, pop_count=1…
2476 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000025326']), pop_n=13836, pop_count=1…
2628 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000020823']), pop_n=13836, pop_count=1…
3760 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000025907']), pop_n=13836, pop_count=1…
4492 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024261']), pop_n=13836, pop_count=1…
[all …]
H A Dgjoneska_goea_consistent_increase.py122 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000022314']), pop_n=13836, pop_count=1…
124 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024943']), pop_n=13836, pop_count=2…
193 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000036353']), pop_n=13836, pop_count=1…
251 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000015950']), pop_n=13836, pop_count=1…
1128 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000063428']), pop_n=13836, pop_count=1…
2122 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000036777']), pop_n=13836, pop_count=2…
2191 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000027639']), pop_n=13836, pop_count=1…
2534 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000045322']), pop_n=13836, pop_count=1…
2764 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000029468']), pop_n=13836, pop_count=1…
3715 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000031107']), pop_n=13836, pop_count=1…
[all …]
H A Dgjoneska_goea_transient_increase.py50 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000020380']), pop_n=13836, pop_count=1…
61 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000029521']), pop_n=13836, pop_count=1…
63 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000006398']), pop_n=13836, pop_count=1…
117 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000038685']), pop_n=13836, pop_count=1…
142 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000036928']), pop_n=13836, pop_count=1…
145 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000025358']), pop_n=13836, pop_count=2…
456 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000032508']), pop_n=13836, pop_count=1…
545 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000027469']), pop_n=13836, pop_count=2…
1308 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000022960']), pop_n=13836, pop_count=1…
2693 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000003873']), pop_n=13836, pop_count=1…
[all …]
H A Dgjoneska_goea_transient_decrease.py86 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000026335']), pop_n=13836, pop_count=1…
125 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000006818']), pop_n=13836, pop_count=1…
158 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024588']), pop_n=13836, pop_count=1…
475 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024588']), pop_n=13836, pop_count=1…
489 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000021466']), pop_n=13836, pop_count=1…
492 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000018750']), pop_n=13836, pop_count=1…
593 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000026335']), pop_n=13836, pop_count=1…
794 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000037071']), pop_n=13836, pop_count=1…
993 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024588']), pop_n=13836, pop_count=1…
1115 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000023927']), pop_n=13836, pop_count=1…
[all …]
/dports/biology/py-goatools/goatools-1.1.6/goatools/
H A Dpvalcalc.py19 def calc_pvalue(self, study_count, study_n, pop_count, pop_n): argument
22 SCNT=study_count, STOT=study_n, PCNT=pop_count, PTOT=pop_n)
34 def calc_pvalue(self, study_count, study_n, pop_count, pop_n): argument
39 return self.pval_fnc(study_count, study_n, pop_count, pop_n).two_tail
51 def calc_pvalue(self, study_count, study_n, pop_count, pop_n): argument
69 dvar = pop_n - pop_count - bvar
71 … A=avar, B=bvar, C=cvar, D=dvar, scnt=study_count, stot=study_n, pcnt=pop_count, ptot=pop_n)
H A Dgo_enrichment.py82 self.pop_n = _popcnt[1]
153 (1.0 * self.pop_count / self.pop_n)) else 'p'
159 self.study_n, self.pop_count, self.pop_n)
262 self.pop_n = len(pop)
352 pop_txt = fmt.format(N=len(pop_items), M=num_gos_pop, NT=self.pop_n)
363 pop_n, study_n = self.pop_n, len(study_in_pop)
370 N=study_n, M=study_n_orig, P=pop_n, R=perc))
387 p_uncorrected=calc_pvalue(study_count, study_n, pop_count, pop_n),
391 ratio_in_pop=(pop_count, pop_n))
457 self.pop_n,
H A Dratio.py39 def is_ratio_different(min_ratio, study_go, study_n, pop_go, pop_n): argument
47 pop_ratio = float(pop_go) / pop_n
H A Dmultiple_testing.py248 def calc_qval(study_n, pop_n, argument
267 pop_n)
/dports/security/py-angr/angr-9.0.5405/angr/exploration_techniques/
H A Dspiller.py53 def pop_n(self, n): member in PickledStatesBase
73 def pop_n(self, n): member in PickledStatesList
107 def pop_n(self, n, stash="spilled"): # pylint:disable=arguments-differ member in PickledStatesDb
190 unpickled = [ (sid, self._load_state(sid)) for _,sid in self._pickled_states.pop_n(n) ]
/dports/devel/cargo-c/cargo-c-0.9.6+cargo-0.58/cargo-crates/libnghttp2-sys-0.1.7+1.45.0/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/
H A Dcodegen.c989 pop_n(n); in gen_values()
1077 pop_n(n+1); in gen_call()
1174 pop_n(2); in gen_assignment()
1238 pop_n(post+1); in gen_vmassignment()
1305 pop_n(i); in gen_literal_array()
1847 pop_n(n); in codegen()
1993 pop_n(len); in codegen()
2198 pop_n(n+1); in codegen()
2266 pop_n(n+1); in codegen()
2639 pop_n(3); in codegen()
[all …]
/dports/net/proby/proby-1.0.2/cargo-crates/libnghttp2-sys-0.1.4+1.41.0/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/
H A Dcodegen.c958 pop_n(n); in gen_values()
1041 pop_n(n+1); in gen_call()
1145 pop_n(2); in gen_assignment()
1209 pop_n(post+1); in gen_vmassignment()
1276 pop_n(i); in gen_literal_array()
1791 pop_n(n); in codegen()
1937 pop_n(len); in codegen()
2142 pop_n(n+1); in codegen()
2210 pop_n(n+1); in codegen()
2577 pop_n(3); in codegen()
[all …]
/dports/devel/cargo-generate/cargo-generate-0.9.0/cargo-crates/libnghttp2-sys-0.1.6+1.43.0/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/
H A Dcodegen.c989 pop_n(n); in gen_values()
1077 pop_n(n+1); in gen_call()
1174 pop_n(2); in gen_assignment()
1238 pop_n(post+1); in gen_vmassignment()
1305 pop_n(i); in gen_literal_array()
1847 pop_n(n); in codegen()
1993 pop_n(len); in codegen()
2198 pop_n(n+1); in codegen()
2266 pop_n(n+1); in codegen()
2639 pop_n(3); in codegen()
[all …]
/dports/www/libnghttp2/nghttp2-1.46.0/third-party/mruby/mrbgems/mruby-compiler/core/
H A Dcodegen.c989 pop_n(n); in gen_values()
1077 pop_n(n+1); in gen_call()
1174 pop_n(2); in gen_assignment()
1238 pop_n(post+1); in gen_vmassignment()
1305 pop_n(i); in gen_literal_array()
1847 pop_n(n); in codegen()
1993 pop_n(len); in codegen()
2198 pop_n(n+1); in codegen()
2266 pop_n(n+1); in codegen()
2639 pop_n(3); in codegen()
[all …]
/dports/lang/rust/rustc-1.58.1-src/vendor/libnghttp2-sys/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/
H A Dcodegen.c958 pop_n(n); in gen_values()
1041 pop_n(n+1); in gen_call()
1145 pop_n(2); in gen_assignment()
1209 pop_n(post+1); in gen_vmassignment()
1276 pop_n(i); in gen_literal_array()
1791 pop_n(n); in codegen()
1937 pop_n(len); in codegen()
2142 pop_n(n+1); in codegen()
2210 pop_n(n+1); in codegen()
2577 pop_n(3); in codegen()
[all …]
/dports/www/h2o-devel/h2o-dcc7134/deps/mruby/mrbgems/mruby-compiler/core/
H A Dcodegen.c957 pop_n(n); in gen_values()
1040 pop_n(n+1); in gen_call()
1144 pop_n(2); in gen_assignment()
1208 pop_n(post+1); in gen_vmassignment()
1275 pop_n(i); in gen_literal_array()
1789 pop_n(n); in codegen()
1935 pop_n(len); in codegen()
2140 pop_n(n+1); in codegen()
2208 pop_n(n+1); in codegen()
2575 pop_n(3); in codegen()
[all …]
/dports/www/nghttp2/nghttp2-1.46.0/third-party/mruby/mrbgems/mruby-compiler/core/
H A Dcodegen.c989 pop_n(n); in gen_values()
1077 pop_n(n+1); in gen_call()
1174 pop_n(2); in gen_assignment()
1238 pop_n(post+1); in gen_vmassignment()
1305 pop_n(i); in gen_literal_array()
1847 pop_n(n); in codegen()
1993 pop_n(len); in codegen()
2198 pop_n(n+1); in codegen()
2266 pop_n(n+1); in codegen()
2639 pop_n(3); in codegen()
[all …]
/dports/net-im/tdlib/td-a53cb30e99f937cfd64e0266fa558785a184a553/tdutils/td/utils/
H A DVectorQueue.h34 void pop_n(size_t n) { in pop_n() function
/dports/www/osrm-backend/osrm-backend-5.26.0/third_party/sol2/sol/
H A Dprotected_handler.hpp87 auto pp = stack::pop_n(L, 1); in get_default_handler()
H A Dtable_core.hpp81 auto pn = stack::pop_n(base_t::lua_state(), 1); in for_each()
93 auto pn = stack::pop_n(base_t::lua_state(), 1); in for_each()
314 auto pn = stack::pop_n(base_t::lua_state(), static_cast<int>(sizeof...(Keys) - 2)); in traverse_set()
360 auto pn = stack::pop_n(base_t::lua_state(), static_cast<int>(sizeof...(Keys) - 2)); in traverse_raw_set()
/dports/devel/sol2/sol2-4.0.0-alpha/include/sol/
H A Dprotected_handler.hpp85 auto pp = stack::pop_n(L_, 1); in get_default_handler()
H A Dstack.hpp78 auto pn = stack::pop_n(r.lua_state(), 1); in clear_entries()
289 auto pn = pop_n(L, 1); in get_call_syntax()
330 auto pn = pop_n(L, 1); in luajit_exception_handler()
/dports/emulators/mess/mame-mame0226/3rdparty/sol2/sol/
H A Dstack.hpp189 auto pn = pop_n(L, 1); in get_call_syntax()
211 auto pn = pop_n(L, 1); in luajit_exception_handler()
/dports/emulators/mame/mame-mame0226/3rdparty/sol2/sol/
H A Dstack.hpp189 auto pn = pop_n(L, 1); in get_call_syntax()
211 auto pn = pop_n(L, 1); in luajit_exception_handler()

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