/dports/biology/py-goatools/goatools-1.1.6/goatools/test_data/ |
H A D | gjoneska_goea_late_increase.py | 461 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000015243']), pop_n=13836, pop_count=1… 484 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000027168']), pop_n=13836, pop_count=1… 489 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000075254']), pop_n=13836, pop_count=1… 968 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000062031']), pop_n=13836, pop_count=1… 1006 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000022125']), pop_n=13836, pop_count=1… 2094 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000014361']), pop_n=13836, pop_count=1… 2681 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000027239']), pop_n=13836, pop_count=1… 3296 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000026796']), pop_n=13836, pop_count=1… 5325 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000085793']), pop_n=13836, pop_count=1… 5342 …, p_fdr_bh=0.62384385231298878, study_items=set([u'ENSMUSG00000050912']), pop_n=13836, pop_count=1… [all …]
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H A D | gjoneska_goea_late_decrease.py | 49 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000026354']), pop_n=13836, pop_count=1… 296 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000051790']), pop_n=13836, pop_count=2… 333 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000021270']), pop_n=13836, pop_count=2… 654 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000028222']), pop_n=13836, pop_count=1… 1112 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000051790']), pop_n=13836, pop_count=1… 2267 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000050751']), pop_n=13836, pop_count=1… 2793 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000039239']), pop_n=13836, pop_count=2… 2984 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000000308']), pop_n=13836, pop_count=1… 3938 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000030695']), pop_n=13836, pop_count=1… 4431 …, p_fdr_bh=0.90732713543638133, study_items=set([u'ENSMUSG00000031012']), pop_n=13836, pop_count=1… [all …]
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H A D | gjoneska_goea_consistent_decrease.py | 49 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000032306']), pop_n=13836, pop_count=1… 194 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000048154']), pop_n=13836, pop_count=1… 334 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000023951']), pop_n=13836, pop_count=1… 2019 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000031622']), pop_n=13836, pop_count=1… 2069 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000048482']), pop_n=13836, pop_count=1… 2218 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000050379']), pop_n=13836, pop_count=1… 2476 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000025326']), pop_n=13836, pop_count=1… 2628 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000020823']), pop_n=13836, pop_count=1… 3760 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000025907']), pop_n=13836, pop_count=1… 4492 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024261']), pop_n=13836, pop_count=1… [all …]
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H A D | gjoneska_goea_consistent_increase.py | 122 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000022314']), pop_n=13836, pop_count=1… 124 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024943']), pop_n=13836, pop_count=2… 193 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000036353']), pop_n=13836, pop_count=1… 251 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000015950']), pop_n=13836, pop_count=1… 1128 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000063428']), pop_n=13836, pop_count=1… 2122 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000036777']), pop_n=13836, pop_count=2… 2191 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000027639']), pop_n=13836, pop_count=1… 2534 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000045322']), pop_n=13836, pop_count=1… 2764 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000029468']), pop_n=13836, pop_count=1… 3715 …, p_fdr_bh=0.85103292532004937, study_items=set([u'ENSMUSG00000031107']), pop_n=13836, pop_count=1… [all …]
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H A D | gjoneska_goea_transient_increase.py | 50 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000020380']), pop_n=13836, pop_count=1… 61 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000029521']), pop_n=13836, pop_count=1… 63 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000006398']), pop_n=13836, pop_count=1… 117 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000038685']), pop_n=13836, pop_count=1… 142 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000036928']), pop_n=13836, pop_count=1… 145 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000025358']), pop_n=13836, pop_count=2… 456 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000032508']), pop_n=13836, pop_count=1… 545 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000027469']), pop_n=13836, pop_count=2… 1308 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000022960']), pop_n=13836, pop_count=1… 2693 …, p_fdr_bh=0.79409923032044649, study_items=set([u'ENSMUSG00000003873']), pop_n=13836, pop_count=1… [all …]
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H A D | gjoneska_goea_transient_decrease.py | 86 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000026335']), pop_n=13836, pop_count=1… 125 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000006818']), pop_n=13836, pop_count=1… 158 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024588']), pop_n=13836, pop_count=1… 475 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024588']), pop_n=13836, pop_count=1… 489 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000021466']), pop_n=13836, pop_count=1… 492 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000018750']), pop_n=13836, pop_count=1… 593 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000026335']), pop_n=13836, pop_count=1… 794 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000037071']), pop_n=13836, pop_count=1… 993 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000024588']), pop_n=13836, pop_count=1… 1115 …m_bonferroni=1.0, p_fdr_bh=1.0, study_items=set([u'ENSMUSG00000023927']), pop_n=13836, pop_count=1… [all …]
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/dports/biology/py-goatools/goatools-1.1.6/goatools/ |
H A D | pvalcalc.py | 19 def calc_pvalue(self, study_count, study_n, pop_count, pop_n): argument 22 SCNT=study_count, STOT=study_n, PCNT=pop_count, PTOT=pop_n) 34 def calc_pvalue(self, study_count, study_n, pop_count, pop_n): argument 39 return self.pval_fnc(study_count, study_n, pop_count, pop_n).two_tail 51 def calc_pvalue(self, study_count, study_n, pop_count, pop_n): argument 69 dvar = pop_n - pop_count - bvar 71 … A=avar, B=bvar, C=cvar, D=dvar, scnt=study_count, stot=study_n, pcnt=pop_count, ptot=pop_n)
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H A D | go_enrichment.py | 82 self.pop_n = _popcnt[1] 153 (1.0 * self.pop_count / self.pop_n)) else 'p' 159 self.study_n, self.pop_count, self.pop_n) 262 self.pop_n = len(pop) 352 pop_txt = fmt.format(N=len(pop_items), M=num_gos_pop, NT=self.pop_n) 363 pop_n, study_n = self.pop_n, len(study_in_pop) 370 N=study_n, M=study_n_orig, P=pop_n, R=perc)) 387 p_uncorrected=calc_pvalue(study_count, study_n, pop_count, pop_n), 391 ratio_in_pop=(pop_count, pop_n)) 457 self.pop_n,
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H A D | ratio.py | 39 def is_ratio_different(min_ratio, study_go, study_n, pop_go, pop_n): argument 47 pop_ratio = float(pop_go) / pop_n
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H A D | multiple_testing.py | 248 def calc_qval(study_n, pop_n, argument 267 pop_n)
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/dports/security/py-angr/angr-9.0.5405/angr/exploration_techniques/ |
H A D | spiller.py | 53 def pop_n(self, n): member in PickledStatesBase 73 def pop_n(self, n): member in PickledStatesList 107 def pop_n(self, n, stash="spilled"): # pylint:disable=arguments-differ member in PickledStatesDb 190 unpickled = [ (sid, self._load_state(sid)) for _,sid in self._pickled_states.pop_n(n) ]
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/dports/devel/cargo-c/cargo-c-0.9.6+cargo-0.58/cargo-crates/libnghttp2-sys-0.1.7+1.45.0/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/ |
H A D | codegen.c | 989 pop_n(n); in gen_values() 1077 pop_n(n+1); in gen_call() 1174 pop_n(2); in gen_assignment() 1238 pop_n(post+1); in gen_vmassignment() 1305 pop_n(i); in gen_literal_array() 1847 pop_n(n); in codegen() 1993 pop_n(len); in codegen() 2198 pop_n(n+1); in codegen() 2266 pop_n(n+1); in codegen() 2639 pop_n(3); in codegen() [all …]
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/dports/net/proby/proby-1.0.2/cargo-crates/libnghttp2-sys-0.1.4+1.41.0/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/ |
H A D | codegen.c | 958 pop_n(n); in gen_values() 1041 pop_n(n+1); in gen_call() 1145 pop_n(2); in gen_assignment() 1209 pop_n(post+1); in gen_vmassignment() 1276 pop_n(i); in gen_literal_array() 1791 pop_n(n); in codegen() 1937 pop_n(len); in codegen() 2142 pop_n(n+1); in codegen() 2210 pop_n(n+1); in codegen() 2577 pop_n(3); in codegen() [all …]
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/dports/devel/cargo-generate/cargo-generate-0.9.0/cargo-crates/libnghttp2-sys-0.1.6+1.43.0/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/ |
H A D | codegen.c | 989 pop_n(n); in gen_values() 1077 pop_n(n+1); in gen_call() 1174 pop_n(2); in gen_assignment() 1238 pop_n(post+1); in gen_vmassignment() 1305 pop_n(i); in gen_literal_array() 1847 pop_n(n); in codegen() 1993 pop_n(len); in codegen() 2198 pop_n(n+1); in codegen() 2266 pop_n(n+1); in codegen() 2639 pop_n(3); in codegen() [all …]
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/dports/www/libnghttp2/nghttp2-1.46.0/third-party/mruby/mrbgems/mruby-compiler/core/ |
H A D | codegen.c | 989 pop_n(n); in gen_values() 1077 pop_n(n+1); in gen_call() 1174 pop_n(2); in gen_assignment() 1238 pop_n(post+1); in gen_vmassignment() 1305 pop_n(i); in gen_literal_array() 1847 pop_n(n); in codegen() 1993 pop_n(len); in codegen() 2198 pop_n(n+1); in codegen() 2266 pop_n(n+1); in codegen() 2639 pop_n(3); in codegen() [all …]
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/dports/lang/rust/rustc-1.58.1-src/vendor/libnghttp2-sys/nghttp2/third-party/mruby/mrbgems/mruby-compiler/core/ |
H A D | codegen.c | 958 pop_n(n); in gen_values() 1041 pop_n(n+1); in gen_call() 1145 pop_n(2); in gen_assignment() 1209 pop_n(post+1); in gen_vmassignment() 1276 pop_n(i); in gen_literal_array() 1791 pop_n(n); in codegen() 1937 pop_n(len); in codegen() 2142 pop_n(n+1); in codegen() 2210 pop_n(n+1); in codegen() 2577 pop_n(3); in codegen() [all …]
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/dports/www/h2o-devel/h2o-dcc7134/deps/mruby/mrbgems/mruby-compiler/core/ |
H A D | codegen.c | 957 pop_n(n); in gen_values() 1040 pop_n(n+1); in gen_call() 1144 pop_n(2); in gen_assignment() 1208 pop_n(post+1); in gen_vmassignment() 1275 pop_n(i); in gen_literal_array() 1789 pop_n(n); in codegen() 1935 pop_n(len); in codegen() 2140 pop_n(n+1); in codegen() 2208 pop_n(n+1); in codegen() 2575 pop_n(3); in codegen() [all …]
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/dports/www/nghttp2/nghttp2-1.46.0/third-party/mruby/mrbgems/mruby-compiler/core/ |
H A D | codegen.c | 989 pop_n(n); in gen_values() 1077 pop_n(n+1); in gen_call() 1174 pop_n(2); in gen_assignment() 1238 pop_n(post+1); in gen_vmassignment() 1305 pop_n(i); in gen_literal_array() 1847 pop_n(n); in codegen() 1993 pop_n(len); in codegen() 2198 pop_n(n+1); in codegen() 2266 pop_n(n+1); in codegen() 2639 pop_n(3); in codegen() [all …]
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/dports/net-im/tdlib/td-a53cb30e99f937cfd64e0266fa558785a184a553/tdutils/td/utils/ |
H A D | VectorQueue.h | 34 void pop_n(size_t n) { in pop_n() function
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/dports/www/osrm-backend/osrm-backend-5.26.0/third_party/sol2/sol/ |
H A D | protected_handler.hpp | 87 auto pp = stack::pop_n(L, 1); in get_default_handler()
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H A D | table_core.hpp | 81 auto pn = stack::pop_n(base_t::lua_state(), 1); in for_each() 93 auto pn = stack::pop_n(base_t::lua_state(), 1); in for_each() 314 auto pn = stack::pop_n(base_t::lua_state(), static_cast<int>(sizeof...(Keys) - 2)); in traverse_set() 360 auto pn = stack::pop_n(base_t::lua_state(), static_cast<int>(sizeof...(Keys) - 2)); in traverse_raw_set()
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/dports/devel/sol2/sol2-4.0.0-alpha/include/sol/ |
H A D | protected_handler.hpp | 85 auto pp = stack::pop_n(L_, 1); in get_default_handler()
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H A D | stack.hpp | 78 auto pn = stack::pop_n(r.lua_state(), 1); in clear_entries() 289 auto pn = pop_n(L, 1); in get_call_syntax() 330 auto pn = pop_n(L, 1); in luajit_exception_handler()
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/dports/emulators/mess/mame-mame0226/3rdparty/sol2/sol/ |
H A D | stack.hpp | 189 auto pn = pop_n(L, 1); in get_call_syntax() 211 auto pn = pop_n(L, 1); in luajit_exception_handler()
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/dports/emulators/mame/mame-mame0226/3rdparty/sol2/sol/ |
H A D | stack.hpp | 189 auto pn = pop_n(L, 1); in get_call_syntax() 211 auto pn = pop_n(L, 1); in luajit_exception_handler()
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