Home
last modified time | relevance | path

Searched refs:possibleMultiplier (Results 1 – 6 of 6) sorted by relevance

/dports/science/opsin/dan2097-opsin-9b25f7546b67/opsin-core/src/main/java/uk/ac/cam/ch/wwmm/opsin/
H A DFunctionalReplacement.java148 Element possibleMultiplier = OpsinTools.getPreviousSibling(group); in processPrefixFunctionalReplacementNomenclature() local
149 if (possibleMultiplier != null) { in processPrefixFunctionalReplacementNomenclature()
151 if (possibleMultiplier.getName().equals(MULTIPLIER_EL)) { in processPrefixFunctionalReplacementNomenclature()
153 possibleLocant = OpsinTools.getPreviousSibling(possibleMultiplier); in processPrefixFunctionalReplacementNomenclature()
154 multiplierEl = possibleMultiplier; in processPrefixFunctionalReplacementNomenclature()
157 possibleLocant = possibleMultiplier; in processPrefixFunctionalReplacementNomenclature()
892 Element possibleMultiplier = OpsinTools.getPreviousSibling(possibleInfix); in disambiguateMultipliedInfixMeaning() local
893 if (possibleMultiplier.getName().equals(MULTIPLIER_EL)){ in disambiguateMultipliedInfixMeaning()
894 int multiplierValue =Integer.parseInt(possibleMultiplier.getAttributeValue(VALUE_ATR)); in disambiguateMultipliedInfixMeaning()
901 Element possibleLocant = OpsinTools.getPreviousSibling(possibleMultiplier); in disambiguateMultipliedInfixMeaning()
[all …]
H A DWordRules.java573 Element possibleMultiplier = OpsinTools.getPreviousSibling(functionalGroups.get(0)); in oxidationNumberOrMultiplierIs() local
574 if (possibleMultiplier != null && possibleMultiplier.getName().equals(MULTIPLIER_EL)) { in oxidationNumberOrMultiplierIs()
575 return Integer.parseInt(possibleMultiplier.getAttributeValue(VALUE_ATR)) == expectedVal; in oxidationNumberOrMultiplierIs()
701 Element possibleMultiplier = OpsinTools.getPreviousSibling(oxideGroup); in setOxideStructureAppropriately() local
702 if (possibleMultiplier != null && in setOxideStructureAppropriately()
703 possibleMultiplier.getName().equals(MULTIPLIER_EL)){ in setOxideStructureAppropriately()
704 multiplierVal = Integer.parseInt(possibleMultiplier.getAttributeValue(VALUE_ATR)); in setOxideStructureAppropriately()
746 possibleMultiplier.detach(); in setOxideStructureAppropriately()
H A DFusedRingBuilder.java96 Element possibleMultiplier = OpsinTools.getPreviousSibling(lastGroup); in buildFusedRing() local
97 …if (nameComponents.size()>0 && possibleMultiplier !=null && possibleMultiplier.getName().equals(MU… in buildFusedRing()
98 numberOfParents = Integer.parseInt(possibleMultiplier.getAttributeValue(VALUE_ATR)); in buildFusedRing()
99 possibleMultiplier.detach(); in buildFusedRing()
527 Element possibleMultiplier = OpsinTools.getPreviousSibling(group); in processBenzoFusions() local
528 …if (possibleMultiplier == null || !possibleMultiplier.getName().equals(MULTIPLIER_EL) || possibleM… in processBenzoFusions()
H A DComponentGenerator.java364 if (possibleMultiplier != null && possibleMultiplier.getName().equals(MULTIPLIER_EL)) { in ifCarbohydrateLocantConvertToAminoAcidStyleLocant()
387 OpsinTools.insertBefore(possibleMultiplier, newLocant); in ifCarbohydrateLocantConvertToAminoAcidStyleLocant()
1188 if (possibleMultiplier.getName().equals(MULTIPLIER_EL)){ in processInfixes()
1203 possibleBracket=possibleMultiplier; in processInfixes()
1204 possibleMultiplier=null; in processInfixes()
1212 if (possibleMultiplier!=null){ in processInfixes()
1217 possibleMultiplier.detach(); in processInfixes()
1228 possibleMultiplier.detach(); in processInfixes()
1231 …else if (possibleMultiplier!=null && GROUP_TYPE_VAL.equals(possibleMultiplier.getAttributeValue(TY… in processInfixes()
2416 if (possibleMultiplier!=null && possibleMultiplier.getName().equals(MULTIPLIER_EL)){ in handleGroupIrregularities()
[all …]
H A DStructureBuilder.java394 Element possibleMultiplier = OpsinTools.getPreviousSibling(functionalGroups.get(0)); in buildMonovalentFunctionalGroup() local
396 if (possibleMultiplier!=null){ in buildMonovalentFunctionalGroup()
397 int multiplierValue = Integer.parseInt(possibleMultiplier.getAttributeValue(VALUE_ATR)); in buildMonovalentFunctionalGroup()
401 possibleMultiplier.detach(); in buildMonovalentFunctionalGroup()
1044 Element possibleMultiplier = OpsinTools.getPreviousSibling(functionalGroups.get(0)); in buildAcidHalideOrPseudoHalide() local
1046 if (possibleMultiplier != null){ in buildAcidHalideOrPseudoHalide()
1047 int multiplierValue = Integer.parseInt(possibleMultiplier.getAttributeValue(VALUE_ATR)); in buildAcidHalideOrPseudoHalide()
1054 possibleMultiplier.detach(); in buildAcidHalideOrPseudoHalide()
1107 Element possibleMultiplier = OpsinTools.getPreviousSibling(functionGroup); in buildAdditionCompound() local
1109 if (possibleMultiplier != null) { in buildAdditionCompound()
[all …]
H A DComponentProcessor.java2029 if (MULTIPLIER_EL.equals(possibleMultiplier.getName())){ in detectConjunctiveSuffixGroups()
2040 possibleMultiplier.detach(); in detectConjunctiveSuffixGroups()
3739 if (possibleMultiplier != null) { in processFusedRingBridges()
3741 if (possibleMultiplier.getName().equals(MULTIPLIER_EL)) { in processFusedRingBridges()
3744 possibleMultiplier.detach(); in processFusedRingBridges()
3762 possibleLocant = possibleMultiplier; in processFusedRingBridges()
4370 possibleMultiplier.detach(); in implicitlyBracketToPreviousSubstituentIfAppropriate()
4371 bracket.addChild(possibleMultiplier); in implicitlyBracketToPreviousSubstituentIfAppropriate()
4871 Element possibleMultiplier = substituentContent.get(0); in moveErroneouslyPositionedLocantsAndMultipliers() local
4874 possibleMultiplier = substituentContent.get(1); in moveErroneouslyPositionedLocantsAndMultipliers()
[all …]