Searched refs:primer_quality (Results 1 – 7 of 7) sorted by relevance
283 double primer_quality; member
341 a->pr_pair_weights.primer_quality = PAIR_WT_PRIMER_PENALTY;
1807 if(pa->pr_pair_weights.primer_quality)1808 sum += pa->pr_pair_weights.primer_quality * (h->left->quality + h->right->quality);
499 … doubleProperties.insert("PRIMER_PAIR_WT_PR_PENALTY", &primerArgs.pr_pair_weights.primer_quality); in initMaps()
150 double primer_quality; member
730 a->pr_pair_weights.primer_quality = 1; in pr_set_default_global_args_1()1403 if (pa->pr_pair_weights.primer_quality * in choose_pair_or_triple()1467 if (pa->pr_pair_weights.primer_quality * in choose_pair_or_triple()4360 if(pa->pr_pair_weights.primer_quality) /* HERE 1 */ in obj_fn()4361 sum += pa->pr_pair_weights.primer_quality * (h->left->quality + h->right->quality); in obj_fn()7971 p->pr_pair_weights.primer_quality = val ; in p3_set_gs_primer_pair_wt_pr_penalty()8663 printf(" primer_quality %f\n", p->pr_pair_weights.primer_quality) ; in p3_print_args()
573 pa->pr_pair_weights.primer_quality); in read_boulder_record()